Pairwise Alignments

Query, 586 a.a., putative Sodium/proton antiporter from Pseudomonas putida KT2440

Subject, 757 a.a., putative Na+/H+ anitporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  395 bits (1016), Expect = e-114
 Identities = 228/563 (40%), Positives = 340/563 (60%), Gaps = 30/563 (5%)

Query: 5   SFIQDLAVIMLVAGVVTILFHRFKQPVVLGYIVAGFIIGPHTPPFGLIHDEDTIKTLAEL 64
           + I DLA+I++ AGV+T+LF + KQP+VLGY+VAGF+  PH P    + D   IKT A++
Sbjct: 6   TLIADLALILICAGVMTLLFKKLKQPLVLGYVVAGFLASPHMPYTPSVMDTANIKTWADI 65

Query: 65  GVIFLMFCLGLEFSLRKLFKVGATAFIAAFLEIVLMIWIGFEIGRWFGWSTMDSLFLGAI 124
           GVIFL+F LGLEFS +K+ KVG +A IAA   I  MI +G  +G  FGW  MDSLFLG +
Sbjct: 66  GVIFLLFALGLEFSFKKIVKVGGSAIIAACTIIFCMILLGIGVGMGFGWHRMDSLFLGGM 125

Query: 125 LAISSTTIIVKALNDLKMKNERFAQLIFGVLIVEDILGIGIIALLSGIAVSGTVSSGEVF 184
           +A+SSTTII KA +DL ++ ++F  L+  +LI+EDIL I ++ +LS +AVS      E+ 
Sbjct: 126 IAMSSTTIIYKAFDDLGLRKKQFTGLVLSILILEDILAIVLMVMLSTMAVSHNFEGTEML 185

Query: 185 STVGKLSLFMVVALVIGILLVPRLLAYVARFESNEMLLITVLGLCFGFCLLVVKLEYSMV 244
            ++GKL  F+++  V+GI L+P  L    +    E LLI  L LCFG  ++     +S  
Sbjct: 186 ESIGKLLFFLILWFVVGIYLIPEFLKRCRKLMGEETLLIVSLALCFGMVVMAANTGFSAA 245

Query: 245 LGAFLIGAIMAESRQLLKIERLIEPVRDLFSAIFFVAIGMMIDPEVLIDYAWPIVVITLA 304
            GAF++G+I+AE+ +   I+RL++PV+DLF AIFFV++GMM+DP ++I+YA PI+VIT+A
Sbjct: 246 FGAFIMGSILAETIEAESIDRLVKPVKDLFGAIFFVSVGMMVDPAMIIEYAIPIIVITIA 305

Query: 305 VVLGKMLSCGMGAFIAGNDGRTSLRVGMGLSQIGEFSFIIAALGMTLQVTSDFLYPVAVA 364
           V+LG+      G  ++G   +T+++ G  L+QIGEF+FIIA+LG++L VTSDFLYP+ VA
Sbjct: 306 VILGQATFGTFGVILSGKPLKTAMQCGFSLTQIGEFAFIIASLGVSLHVTSDFLYPIVVA 365

Query: 365 VSAITTLLTPYLIRAADPLSQKLGNVVPARLARVLSLYGEWLRNIQPQGE--SAMLAAMI 422
           VS ITT LTPY+IR A+P S  +   +PA   + L  Y    + +         +L AM+
Sbjct: 366 VSVITTFLTPYMIRLAEPASSFVDAHLPASWRKFLMRYSSGSQTVLNHENLWKKLLLAMV 425

Query: 423 RRILLQVGVNLALVIAIF-FSGGYFAGRLGNWLSEWVSDVSHQKAVIWGAALLLSLPFLI 481
           R  ++   V+++++   F F   +F   L ++   W S              LL   F+I
Sbjct: 426 RITVVYSIVSISIIALSFRFVVPFFKENLPHF---WAS--------------LLGAVFII 468

Query: 482 AAYRKLKALSMLLAEMGVKPEMAGRHTQRVRRVIAEVIPLLSLLVIFLLLSALSA----S 537
                     M+     V+  M   H  R  R      PL+S +VI ++++AL      S
Sbjct: 469 LCISPFLRAIMVKKNHSVE-FMTLWHDNRANRA-----PLVSTIVIRIMIAALFVIFVIS 522

Query: 538 ILPTSELLLVIAVVAAVVVALLW 560
            L  + + L+I V    V+ ++W
Sbjct: 523 GLFKASIGLIIGVAVLAVLLMVW 545