Pairwise Alignments

Query, 728 a.a., DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex from Pseudomonas putida KT2440

Subject, 720 a.a., DNA-dependent helicase II from Klebsiella michiganensis M5al

 Score =  910 bits (2351), Expect = 0.0
 Identities = 451/725 (62%), Positives = 566/725 (78%), Gaps = 7/725 (0%)

Query: 5   DLSLLLNSLNDAQRQAVAATLGRQLVLAGAGSGKTRVLVHRIAWLIQVEQASPHSILSVT 64
           D+S LL+SLND QR+AVAA+    LVLAGAGSGKTRVLVHRIAWL+ VE  SP+SI++VT
Sbjct: 2   DVSYLLDSLNDKQREAVAASRTNMLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAVT 61

Query: 65  FTNKAAAEMRQRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEARLVQNFQILDSDDQQR 124
           FTNKAAAEMR RI QL+G    GMWVGTFHGLAHRLLRAH  +A L Q+FQILDS+DQ R
Sbjct: 62  FTNKAAAEMRHRIGQLMGTTQGGMWVGTFHGLAHRLLRAHHLDANLPQDFQILDSEDQLR 121

Query: 125 LIKRVMRELGLDEQKWPARQAQWFINGQKDEGLRPQHIQAGGDLFLATMREVYTAYEQAC 184
           L+KR+++ + LDE++WP RQA W+INGQKDEGLRP HIQ+ G+    T ++VY AY++AC
Sbjct: 122 LLKRLIKAMNLDEKQWPPRQAMWYINGQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEAC 181

Query: 185 ERAGVIDFSELLLRALDLWRDHPGLLEHYQRRFRHVLVDEFQDTNAVQYAWLRLLARGGD 244
           +RAG++DF+ELLLRA +LW + P +L+HY+ RF ++LVDEFQDTN +QYAW+RLLA    
Sbjct: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241

Query: 245 SLMAVGDDDQSIYGWRGAKIENIHQYTADFPDAEMIRLEQNYRSTGGILKAANALIANNS 304
            +M VGDDDQSIYGWRGA++ENI ++  DFP AE IRLEQNYRST  IL AANALI NNS
Sbjct: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNS 301

Query: 305 GRLGKELWTDMGEGEPLTLYAAYNEHDEARYVVETIESLVKQGNARNEIAILYRSNAQSR 364
           GRLGK+LWTD  +GEP++LY A+N+ DEAR+VV  I++  + G A  + AILYRSNAQSR
Sbjct: 302 GRLGKKLWTDGADGEPISLYCAFNDLDEARFVVNRIKTWQENGGALEQCAILYRSNAQSR 361

Query: 365 VLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLIEGRGNDAALERVINVPPRGIGEK 424
           VLEEALL+  +PYRIYGG RFFER EIK+A++YLRLI  R +DAA ERV+N P RGIG++
Sbjct: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421

Query: 425 TVEAIREHARHSQLSMWEAMCQLIAAKALKGRAASALGAFIELIEGLAAKVVDMPLHTMT 484
           T++ +R+ +R  QL++W+A  +L+  K L GRAASAL  F+ELI+ LA +  DMPLH  T
Sbjct: 422 TLDVVRQTSRDRQLTLWQACRELLKDKVLAGRAASALQRFMELIDALAQETADMPLHVQT 481

Query: 485 QTTIEQSGLITYHQEEKGEKGQARVENLEELVSAARNFESTDEDADLSPLSAFLGHASLE 544
              I+ SGL   +++EKGEKGQ R+ENLEELV+A R F   +ED DL PL AFL HA+LE
Sbjct: 482 DRVIKDSGLRMMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALE 541

Query: 545 AGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRLAYV 604
           AG+ QAD  +D++QLMTLHSAKGLEFP VF+VG+EEG+FP +M+L+E GRLEEERRLAYV
Sbjct: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGVEEGMFPSQMALDEGGRLEEERRLAYV 601

Query: 605 GITRAMRQLVMTYAETRRLYGSETYNKVSRFVREIPAGLVQEVRLSNSVSRPFGGAKTAT 664
           G+TRAM++L +TYAETRRLYG E Y++ SRF+ E+P   V+EVRL  +VSRP    +  T
Sbjct: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPESCVEEVRLRATVSRPVSHQRMGT 661

Query: 665 NSNLFANASIPQTAFNLGQRVQHAVFGEGVILNFEGSGAQARVQVNF-AEGSKWLMLGYA 723
                   +   T + LGQRV+HA FGEG I+N EGSG  +R+QV F  +G KWL+  YA
Sbjct: 662 ------PMAENDTGYKLGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYA 715

Query: 724 KLEAV 728
           +LE V
Sbjct: 716 RLETV 720