Pairwise Alignments

Query, 288 a.a., Transcriptional regulator, RpiR family from Pseudomonas putida KT2440

Subject, 284 a.a., transcriptional regulator, RpiR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  225 bits (574), Expect = 8e-64
 Identities = 121/283 (42%), Positives = 173/283 (61%)

Query: 1   MNLLQHIAQSRHLLRKSELKVADHVLLDPAAVMHSSMADLAHSVGISEPTIVRFCRAIGC 60
           MN L+ + +S     KSE KVA+ +L  P   +HSS+A LA    +SEPT+ RFCR +  
Sbjct: 1   MNTLEKVQKSLTHFSKSERKVAEVILASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDT 60

Query: 61  SGFQDLKLKLAQSLAAGASFGQFAIHEDDSVADYSLKIFDTTLHTLMEVREHLDPQALQQ 120
            GF D KL LAQSLA G  +    + EDDS   Y+ KIF++++ +L   R+ LD  A+ +
Sbjct: 61  KGFPDFKLHLAQSLANGTPYVSRHVEEDDSPESYTTKIFESSMASLDTARQSLDVAAINK 120

Query: 121 AVSAMAQAQRVEFYGFGASGAVAADAQHKFFRLLLSAAAYSDPHMQAMSAVTLKPGDVAV 180
           AV  + QA+ + F+G GAS +VA DAQ+KFFR  +    + D  MQ MS +    GDV V
Sbjct: 121 AVDILTQAKTISFFGLGASASVAHDAQNKFFRFNVPVICFDDVLMQRMSCINSNEGDVVV 180

Query: 181 CISQSGRSKDLLITANLVRESGANLITLCPSQTPLAELSTVNLAIDVHEDTEIYTPLTSR 240
            IS +GR+K L+  A L RE+GA +I +    +PL+   T+ + ++V EDT++Y P+ SR
Sbjct: 181 LISHTGRTKSLIEIARLARENGAAVIGITARNSPLSMECTLPVTMEVPEDTDMYLPMASR 240

Query: 241 IAHLVVIDVLAMGVAMARGPSLVNHLKSVKRSLRSLRLSPKSI 283
           +A LV IDVLA G  + RGP   ++LK VK  L+  R++   I
Sbjct: 241 LAQLVTIDVLATGFTLRRGPRFRDNLKRVKEVLKESRINKDPI 283