Pairwise Alignments

Query, 320 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 304 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  109 bits (272), Expect = 1e-28
 Identities = 77/283 (27%), Positives = 135/283 (47%), Gaps = 2/283 (0%)

Query: 6   MRMTLRQLQIFNEVCDLRSYSRAAEEMALTQPAVSLQIRQLEELIGQPLFEYVGKKLYLT 65
           M+ TL+Q+ +F+ V  L S S AA ++++TQ AVS+ ++QLE L+G+PLF   G +L L+
Sbjct: 1   MKYTLKQMSVFDAVASLESVSGAARKLSMTQSAVSMSLQQLESLLGRPLFIRQGNRLMLS 60

Query: 66  EAAEALQRASHDIFGRLESLDMQLSDMQGSLQGQLKL-AIESSAKYFVPHLFAAFKQRHP 124
                L+  +  +    + + M L D Q  L G L + A +++A++ +  L +      P
Sbjct: 61  HWGHWLRPRARKLLADAQQIAMGLHD-QHLLSGSLSMGASQTAAEHLLGDLISRLDSDFP 119

Query: 125 EVNLTLTVVNRAQAIRRLSDNRDDLIIMSMVPQDMGLEFLPFLNNPIVAVAPPQHPLCKL 184
           ++++ L V N    I  + +   D  I+     D  L   P+L++ +V +A P HP  K 
Sbjct: 120 QIHIELMVENTENVITAVQEYEVDFGIIEGRSDDAHLVLEPWLDDHLVVIAAPHHPYGKY 179

Query: 185 EQLRMQDLEPHTLLVREQGSGTRKACEEYFKDKRVHFAQTLEVASADAQRECVIAGLGIA 244
             + +  LE    ++REQG+GTR+  +              E       +  V  G  ++
Sbjct: 180 GNVSLSQLEQAKWVLREQGAGTRRIFDAAIHGNLDRLNVWREYEQVPVLKALVKNGPYLS 239

Query: 245 LLTRHAVNLELATGMLKELPVEELPLYRSWCVVQAKAKRQSPV 287
            L    V  ++A G L  L   +L + R    V      ++P+
Sbjct: 240 ALPYLDVERDVAAGQLIILSTPKLNMKRQLSFVWRADATENPL 282