Pairwise Alignments

Query, 367 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 366 a.a., Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  635 bits (1639), Expect = 0.0
 Identities = 315/367 (85%), Positives = 335/367 (91%), Gaps = 3/367 (0%)

Query: 1   MVRLKRLLAPFIAATLFAGALHAQAEQRTLRVYNWFDYITPQTLTAFQ-KDSGVKLVYDI 59
           M RLKR +AP + A L  GA+  QAE+RTLRVYNWFDYITP+ L  F+ ++S VKLVYDI
Sbjct: 1   MNRLKRFMAPAVCAALLCGAV--QAEERTLRVYNWFDYITPKALEDFKAQNSQVKLVYDI 58

Query: 60  FDTNEALEAKLLTGNSGYDVVVPSNVFLAKQIEAGVFQPLDRSKLPNWQHLDPALMKLIE 119
           FDTNEALEAKLLTGNSGYDVVVPSNVFLAKQIEAGVFQPLDRSKLPNW HLDP LMKLIE
Sbjct: 59  FDTNEALEAKLLTGNSGYDVVVPSNVFLAKQIEAGVFQPLDRSKLPNWNHLDPKLMKLIE 118

Query: 120 ANDPGNKFAVPYMYGTVLIGFNPAKVKAALGDNAPVDSWDLIFKEENIAKLKQCGVALLD 179
           ANDPGNKFAVPYMYGT+LIGFNP KVKAALGDNAPVDSWDLIFKEENI+KLKQCGVALLD
Sbjct: 119 ANDPGNKFAVPYMYGTILIGFNPDKVKAALGDNAPVDSWDLIFKEENISKLKQCGVALLD 178

Query: 180 SPSEILPLALQYLGLPPNSDKPADYKKAEELMLKIRPHITYFHSSKYMADIANGDICVAV 239
           SPSEILPLALQ+LGL PNS KPADY KAE LM+KIRPHITYFHSSKYMADIANGDICVAV
Sbjct: 179 SPSEILPLALQHLGLDPNSKKPADYAKAEALMMKIRPHITYFHSSKYMADIANGDICVAV 238

Query: 240 GYSGSFSQAANRAREANNGVVVDMRLPKEGAPIWFDMLAIPKGAANPEDAHTFINYLLRP 299
           GYSGSFSQAANRA+EA NGV VDMRLPKEGAPIWFDMLAIPKGAANP DA+ FINYLL+P
Sbjct: 239 GYSGSFSQAANRAKEAKNGVTVDMRLPKEGAPIWFDMLAIPKGAANPGDAYAFINYLLQP 298

Query: 300 EVIAPISDFVGYPNPNKDATDKVNPTIRNNPNLYPTAEAMAKLYTLKPLTRNAERARTRA 359
           +VIAP+SDFVGYPNPNKDATD V+P IRNNPNLYPT  AM  LYTL+PL R+AERARTRA
Sbjct: 299 QVIAPVSDFVGYPNPNKDATDMVDPAIRNNPNLYPTEAAMTTLYTLQPLPRDAERARTRA 358

Query: 360 WTRIKSG 366
           WTRIKSG
Sbjct: 359 WTRIKSG 365