Pairwise Alignments

Query, 367 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 361 a.a., Spermidine/putrescine-binding periplasmic protein from Pseudomonas stutzeri RCH2

 Score =  419 bits (1078), Expect = e-122
 Identities = 202/363 (55%), Positives = 259/363 (71%), Gaps = 3/363 (0%)

Query: 4   LKRLLAPFIAATLFAGALHAQAEQRTLRVYNWFDYITPQTLTAFQKDSGVKLVYDIFDTN 63
           ++  L   + A    GA  AQA   ++ +YNW DYI   TL  F+K++G+K VYD+FD+N
Sbjct: 1   MRSTLKSLLVAAAMTGAATAQAA--SVHIYNWSDYIGETTLEEFEKETGIKPVYDVFDSN 58

Query: 64  EALEAKLLTGNSGYDVVVPSNVFLAKQIEAGVFQPLDRSKLPNWQHLDPALMKLIEANDP 123
           E LE KLL G SGYDVVVPSN FL KQI AG FQ LD+SKLPNW+HLDPAL+K ++ NDP
Sbjct: 59  ETLEGKLLAGRSGYDVVVPSNHFLGKQIRAGAFQALDKSKLPNWEHLDPALLKQLQKNDP 118

Query: 124 GNKFAVPYMYGTVLIGFNPAKVKAALGDNAPVDSWDLIFKEENIAKLKQCGVALLDSPSE 183
           GN  A PY++GT  IG+N  KVKAALG +  +DSW +IF+ EN AKL  CG+A LDS  E
Sbjct: 119 GNAHAAPYLWGTNGIGYNVEKVKAALGVDE-IDSWSVIFEPENAAKLASCGIAFLDSADE 177

Query: 184 ILPLALQYLGLPPNSDKPADYKKAEELMLKIRPHITYFHSSKYMADIANGDICVAVGYSG 243
           ++P  L YLGL PNS+  ADY+KAEE +L +RPH+ YFHSSKY++D+ANG+ICVA G+SG
Sbjct: 178 MIPAMLNYLGLDPNSENAADYQKAEEKLLAVRPHVRYFHSSKYISDLANGNICVAAGFSG 237

Query: 244 SFSQAANRAREANNGVVVDMRLPKEGAPIWFDMLAIPKGAANPEDAHTFINYLLRPEVIA 303
              QAA RA EA  G+ +   +P EGA +WFDMLAIP  A+N E+AH FINYLLRPEVIA
Sbjct: 238 DVFQAAARAEEAGKGIEIAYAIPAEGANLWFDMLAIPADASNVEEAHAFINYLLRPEVIA 297

Query: 304 PISDFVGYPNPNKDATDKVNPTIRNNPNLYPTAEAMAKLYTLKPLTRNAERARTRAWTRI 363
            +SD+VGY NPN  A + ++  +R + ++YP  E + +LY    L    +R  TR WT++
Sbjct: 298 AVSDYVGYANPNLKAGELMDQEVREDASVYPPQEVLDRLYVSAELPPKIQRLMTRTWTKV 357

Query: 364 KSG 366
           KSG
Sbjct: 358 KSG 360