Pairwise Alignments

Query, 367 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 387 a.a., periplasmic binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  134 bits (337), Expect = 4e-36
 Identities = 100/329 (30%), Positives = 153/329 (46%), Gaps = 18/329 (5%)

Query: 16  LFAGALHAQAEQRT-LRVYNWFDYITPQTLTAFQKDSGVKLVYDIFDTNEALEAKLLTGN 74
           LF  A +A  +  T + +  W +Y  P T  AF   +GV +  ++F +NE + AKL  G 
Sbjct: 52  LFNSAAYAAGDLGTQMSIATWPNYHDPATFEAFTAATGVAVEVNVFGSNEEMLAKLQAGG 111

Query: 75  SGYDVVVPSNVFLAKQIEAGVFQPLDRSKLPNWQHLDPALMKLIEANDPGNKFAVPYMYG 134
            G+D+ VP+N  ++  ++ G+   LD SKLPN+           E    G  +AVP  +G
Sbjct: 112 IGWDLFVPTNYTISTYVKLGLIDELDLSKLPNYDASTENARFTNEGIVEGKTYAVPKNWG 171

Query: 135 TVLIGFNPAKVKAALGDNAPVDSWDLIFKEENIAKLKQCGVALL-DSPSEILPLALQYLG 193
           T  I  N  K+K      APV SW   F+   IA  +  G A++ D     +  AL  LG
Sbjct: 172 TTGIAVNSDKIK------APVASWKDFFE---IAMTEADGRAMVHDYQLTTIGNALVSLG 222

Query: 194 LPPNSDKPADYKKAEELMLKIRPHITYFHSSKYMADIANGDICVAVGYSGSFSQAANRAR 253
              NS KP +  KAEEL++K++PH+ Y  +S Y   +   D  + + ++   +Q      
Sbjct: 223 FSFNSIKPEELAKAEELLIKVKPHL-YAINSDYQPSMRATDAWMTMCWTNDGAQLNRDMP 281

Query: 254 EANNGVVVDMRLPKEGAPIWFDMLAIPKGAANPEDAHTFINYLLRPEVIAPISDFVGYPN 313
           E      +   L K+G  IW D  AIPK AAN    +  ++YL+ P          G P 
Sbjct: 282 E------IKFVLGKDGGEIWSDFYAIPKSAANKPAGYALLDYLMTPANAVKEHIANGAPT 335

Query: 314 PNKDATDKVNPTIRNNPNLYPTAEAMAKL 342
            +      +   + +N  +YP   A+  L
Sbjct: 336 TDSRVMKLLPADVTSNKIVYPDEAALTPL 364