Pairwise Alignments

Query, 367 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 364 a.a., putrescine-binding periplasmic protein from Sinorhizobium meliloti 1021

 Score =  356 bits (913), Expect = e-103
 Identities = 180/363 (49%), Positives = 244/363 (67%), Gaps = 3/363 (0%)

Query: 5   KRLLAPFIAATLFAGALHAQAEQRTLRVYNWFDYITPQTLTAFQKDSGVKLVYDIFDTNE 64
           K ++A    A L    + A A++R + VYNW DYI    L  F K++G+K+VYD+FD+NE
Sbjct: 3   KLIVATLTTAVLAGSTILAFAQERVVNVYNWSDYIDDSILEEFTKETGIKVVYDVFDSNE 62

Query: 65  ALEAKLLTGNSGYDVVVPSNVFLAKQIEAGVFQPLDRSKLPNWQHLDPALMKLIEANDPG 124
            LE KLL G SGYDVVVP+  FL +QI AGVFQ LD+SKLPN  ++   +M+     DPG
Sbjct: 63  ILETKLLAGGSGYDVVVPTAYFLQRQIAAGVFQKLDKSKLPNISNMWDMVMERTAQYDPG 122

Query: 125 NKFAVPYMYGTVLIGFNPAKVKAALG-DNAPVDSWDLIFKEENIAKLKQCGVALLDSPSE 183
           N++AV YM+GT  IG+N  K+K  LG D  P  +WD+IF  E  AK K CG+ LLDSP++
Sbjct: 123 NEYAVDYMWGTTGIGYNVEKMKEILGTDEKP--NWDVIFDPEIAAKFKDCGIHLLDSPTD 180

Query: 184 ILPLALQYLGLPPNSDKPADYKKAEELMLKIRPHITYFHSSKYMADIANGDICVAVGYSG 243
           I+P AL YLGL P+S   AD +KA +L++K+RP+I  FHSS+Y+  +ANGDIC+AVG+SG
Sbjct: 181 IMPSALAYLGLNPDSHDQADLEKAADLLMKVRPNIRKFHSSEYINALANGDICLAVGFSG 240

Query: 244 SFSQAANRAREANNGVVVDMRLPKEGAPIWFDMLAIPKGAANPEDAHTFINYLLRPEVIA 303
              QA +RA EA  GV VD  +P++GA +WFDMLAIP  A +  +AH FINY+++PEVIA
Sbjct: 241 DVFQARDRAAEAKAGVTVDYSIPEQGAQMWFDMLAIPADAPHVAEAHEFINYMMKPEVIA 300

Query: 304 PISDFVGYPNPNKDATDKVNPTIRNNPNLYPTAEAMAKLYTLKPLTRNAERARTRAWTRI 363
             S++V Y N NK +   ++  +  +  +YP+   M KL+T  P     +R  TR WTRI
Sbjct: 301 KASNYVFYANGNKASQQFLDKEVLEDTAIYPSDAVMQKLFTTTPFEAKEQRVLTRLWTRI 360

Query: 364 KSG 366
            +G
Sbjct: 361 VTG 363