Pairwise Alignments

Query, 367 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 370 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotF from Klebsiella michiganensis M5al

 Score =  416 bits (1069), Expect = e-121
 Identities = 201/364 (55%), Positives = 266/364 (73%), Gaps = 2/364 (0%)

Query: 5   KRLLAPFIAATLFA-GALHAQAEQRTLRVYNWFDYITPQTLTAFQKDSGVKLVYDIFDTN 63
           K+ L   +   L A  A    AEQ+TL VYNW DYI P T+  F+K++G+K+VYD+FD+N
Sbjct: 6   KKWLTGLVTGALMAVSAGSLAAEQKTLHVYNWSDYIAPDTVANFEKETGIKVVYDVFDSN 65

Query: 64  EALEAKLLTGNSGYDVVVPSNVFLAKQIEAGVFQPLDRSKLPNWQHLDPALMKLIEANDP 123
           E LE KL+ G++G+D+VVPS  FL +Q+ AGVFQPLD+SKLPNW++LDP ++KL+  +DP
Sbjct: 66  EVLEGKLMAGSTGFDLVVPSASFLERQLAAGVFQPLDKSKLPNWKNLDPEVLKLVAKHDP 125

Query: 124 GNKFAVPYMYGTVLIGFNPAKVKAALGDNAPVDSWDLIFKEENIAKLKQCGVALLDSPSE 183
            NK+A+PY++ T  IG+N  KVKA LG +AP+DSWDL+ K EN+ KLK CGV+ LD+P E
Sbjct: 126 DNKYAIPYLWATTGIGYNIDKVKAVLGKDAPLDSWDLVMKPENLEKLKSCGVSFLDAPEE 185

Query: 184 ILPLALQYLGLPPNSDKPADYK-KAEELMLKIRPHITYFHSSKYMADIANGDICVAVGYS 242
           I    L YLG  PNS K  DY   A +L+LK+RP+I YFHSS+Y+ D+ANGDICVA+G++
Sbjct: 186 IFATVLNYLGKDPNSSKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWA 245

Query: 243 GSFSQAANRAREANNGVVVDMRLPKEGAPIWFDMLAIPKGAANPEDAHTFINYLLRPEVI 302
           G   QAANRA+EA NGV V   +PKEGA  +FD+ A+P  A N ++A+ F+NYL+RP+VI
Sbjct: 246 GDVWQAANRAKEAKNGVNVSYFIPKEGALAFFDVFAMPADAKNKDEAYQFLNYLMRPDVI 305

Query: 303 APISDFVGYPNPNKDATDKVNPTIRNNPNLYPTAEAMAKLYTLKPLTRNAERARTRAWTR 362
           A ISD V Y N NK +   V+  IRNNP +YP A+  AKL+TLK      +R RTRAWT+
Sbjct: 306 AHISDHVYYANGNKASLPLVSEEIRNNPAIYPPADVFAKLFTLKVQDPKIDRVRTRAWTK 365

Query: 363 IKSG 366
           +KSG
Sbjct: 366 VKSG 369