Pairwise Alignments

Query, 305 a.a., LysR family transcriptional regulator from Pseudomonas putida KT2440

Subject, 293 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 73.6 bits (179), Expect = 5e-18
 Identities = 65/259 (25%), Positives = 116/259 (44%), Gaps = 28/259 (10%)

Query: 1   MNLESKWLEDFSALAATRSFSQAAERRFVTQPAFSRRIRSLEAALGLQLVNRSRTPIELT 60
           MN+  K L+ F  L  T +F++AA++ F+TQP  S+ I+ LE +LG  L+ R+   +ELT
Sbjct: 1   MNIPIKTLQCFLTLVETENFTRAAQKCFITQPTLSKIIQRLEESLGETLLIRNNQKVELT 60

Query: 61  EAGQLFLVTARTVVDQLSEILRHLHHLEGGQGEVVQVAAAHSLASGFFPRWVAQLRNDGL 120
           +AGQLF  +AR ++ Q   +   + +L G +   +++     ++S             GL
Sbjct: 61  QAGQLFEHSAREILGQWHRLQEDMSNLSGLKSGRLRLGVCPMMSSLII----------GL 110

Query: 121 NIATRLVATNVGDAVHALREGGCDLMLAFYDPDAALQMDAEIFPSLHMGTTEML------ 174
             + R     V   ++     GC+  L     + +L +     P+ H   TE++      
Sbjct: 111 LTSYRKRYPGVELQMYEYGGFGCEQALL----NNSLDIAFTALPTTH--ETELINQPLTK 164

Query: 175 -PVCAVDADGKPL-----FDLEGEGSVPLLAYTAGAFLGRSVNLLLRQRNLRYTTVYETA 228
            P+ A   +  PL        +     P + Y     L + +N L R+  ++    + + 
Sbjct: 165 YPLLACLPEAHPLAAKSYLSWQDFEPYPFILYNEDFSLAKLINRLSRKAGVQLNIAFRSG 224

Query: 229 MADSLKSMALEGMGIAWVP 247
             D L +M    MG+A +P
Sbjct: 225 QWDFLATMVEADMGLAILP 243