Pairwise Alignments

Query, 692 a.a., junction-specific ATP-dependent DNA helicase from Pseudomonas putida KT2440

Subject, 817 a.a., ATP-dependent DNA helicase RecG from Synechococcus elongatus PCC 7942

 Score =  486 bits (1252), Expect = e-141
 Identities = 305/696 (43%), Positives = 404/696 (58%), Gaps = 38/696 (5%)

Query: 9   VTVLKGVGEAMAEKLAKVGLENLQDVLFHLPLRYQDRTRVVPIGQLRPGQDAVIEGVVSG 68
           +T LKGVG  +A +L ++ L  ++D+L H P  Y D  R V I  L PG+ A + G V  
Sbjct: 125 LTYLKGVGPRVAAQLERLELRTVRDLLHHYPRNYVDYARQVNIRALEPGETATLIGAVQR 184

Query: 69  ADVTMGKRRS------LVVRLGDGSGVLTL-RFYHFSNAQKEGLKR--------GTHLRC 113
                  R +      LVVR  DGSG L L RF+  +     G +         GT +  
Sbjct: 185 CTCFTSPRNAKLTILELVVR--DGSGQLRLSRFFMGTRYSGRGWQEQQRRLYPPGTMIAA 242

Query: 114 YGEARPGASGLEIYHPEYRALNGNEPPPPVEQT--LTPIYPSTEGLTQQRLRLLCQQSLA 171
            G  +    G+ + +PE   L+  + P    +   + PIYP TEG+    LR    Q  A
Sbjct: 243 SGLVKRSKYGVTLDNPEIEVLDSPDSPIASLKVGRIVPIYPLTEGVAADTLRRAIVQ--A 300

Query: 172 LLGPRSLPDWLPDELARDYQLAPLDEAIRYLHNPPADADLDELAEGQHWAQHRLAFEELL 231
           L     L D LP  L   +QL  L++AI  +H P       E  E    A+ RL F+E L
Sbjct: 301 LPAAEQLRDPLPTVLREQHQLLVLNQAIAAIHFP-------ETPELLQQARRRLVFDEFL 353

Query: 232 THQLS--QQRLRESLRSLRAPVLPRATRLQAQYLANLGFQPTGAQQRVANEIAYDLSQHE 289
             QL   Q+R R+   +  A + P    +   Y   L FQ TGAQQRV N+I  DL Q  
Sbjct: 354 YLQLGLLQRRARQRAAAAAAVLAPTGELIDRFYQL-LPFQLTGAQQRVVNDILTDLQQPW 412

Query: 290 PMMRLVQGDVGAGKTVVAALAALQALEAGYQVALMAPTEILAEQHYITFKRWLEPLGIEV 349
           PM RLVQGDVG+GKTVVA ++ L A++AGYQ ALMAPTE+LAEQHY     W   L + V
Sbjct: 413 PMNRLVQGDVGSGKTVVAIVSLLAAIQAGYQGALMAPTEVLAEQHYRKLVDWCTQLHLPV 472

Query: 350 AWLAGKLKGKARAASLEQIANGA-PMVVGTHALFQEEVRFKHLALAIIDEQHRFGVQQRL 408
             L G  +   R      +A G  P++VGTHAL Q+ V F++L L +IDEQHRFGV QR 
Sbjct: 473 ELLTGSTRAAKRREIQRSLATGELPLLVGTHALIQDPVDFQNLGLVVIDEQHRFGVAQRA 532

Query: 409 ALRRKGVAGELCPHQLIMTATPIPRTLAMSAYADLDTSVLDELPPGRTPVNTVLVADSRR 468
            L++KGV     PH L MTATPIPRTLA++ + DL+ S +DELPPGR P+ T  +  S R
Sbjct: 533 KLQQKGVN----PHVLTMTATPIPRTLALTLHGDLEVSQIDELPPGRQPIQTTALGPSDR 588

Query: 469 FEVVERVRAACAEGRQAYWVCTLIEESEELTCQAAESTYEELGSALGELKVGLIHGRMKP 528
               + +R   A+GRQ Y V  L+EESE+L  ++A   Y+ L     E ++GL+HGRM  
Sbjct: 589 HHAHDLMRREIAQGRQVYVVLPLVEESEKLDLRSAIEEYQRLSQVFPEFQIGLLHGRMSS 648

Query: 529 AEKAEIMAEFKAGNLQLLVATTVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGS 588
           AEK   +A F+     +LV+TTV+EVGVDVPNA++M+IE+ ER GL+QLHQLRGRVGRG+
Sbjct: 649 AEKDAAIAAFRDRQTDILVSTTVVEVGVDVPNATVMLIEHAERFGLSQLHQLRGRVGRGA 708

Query: 589 AVSHCVLLYHPPLSQIGRERLGIMRETNDGFIIAEKDLELRGPGEMLGTRQTGLLQFKVA 648
           A S+C LL     S+  ++RL +M ++ DGF IAE DL LRGPG++LGTRQ+GL  F +A
Sbjct: 709 ARSYC-LLMSASRSETAQQRLKVMEQSQDGFFIAEMDLRLRGPGQVLGTRQSGLPDFALA 767

Query: 649 DLMRDADLLPAVRDAAQALVSRWPEHV-SPLLDRWL 683
            L+ D D+L   R  A+ L+ + PE   SPLL + L
Sbjct: 768 SLVEDQDVLDLARTTAEQLIEQDPELTRSPLLKQEL 803