Pairwise Alignments

Query, 702 a.a., bifunctional (p)ppGpp synthase/hydrolase from Pseudomonas putida KT2440

Subject, 738 a.a., GTP diphosphokinase from Vibrio cholerae E7946 ATCC 55056

 Score =  393 bits (1010), Expect = e-113
 Identities = 224/681 (32%), Positives = 363/681 (53%), Gaps = 42/681 (6%)

Query: 55  ILADMHMDHQSLMAAMLHDVIEDTGIAKEALSQQFGETVAELVDGVSKLT---QMNFE-- 109
           IL  + MD  +L+AA+L  +     +  E+L + +G  V +L+ GV ++    Q+N    
Sbjct: 64  ILITLSMDRPTLVAALLFPIATSGVLDNESLEEGYGREVVKLIHGVEEMAAIGQLNVTMH 123

Query: 110 -TKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKETLEIYAP 168
            ++A AQ +N ++M +AM  D R +++KLA+R+ N+R ++    E RR  AKE   IYAP
Sbjct: 124 GSEASAQVDNVRRMLLAMVDDFRCVVIKLAERICNLREVKNEPDEVRRVAAKECANIYAP 183

Query: 169 IANRLGMHTVRVEFEDLGFKAMHPMRSSLIHRAVKSARGNRKEIVAKIEHSLANCLAADG 228
           +ANRLG+  ++ E ED  F+   P     I + +   R  R++ +      L   +   G
Sbjct: 184 LANRLGIGQLKWEIEDYAFRYQQPDTYKQIAKQLSERRIVREQYIRDFVSDLRAEMKQSG 243

Query: 229 IEGEVSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIVDKVDTCYRVLGAVHNLYKPLP 288
           I  EVSGR KH+Y I++KM+ K  AF+E+ DV A RII DK+  CY  LG VH  YK LP
Sbjct: 244 INAEVSGRPKHIYSIWRKMQKKSLAFDELFDVRAVRIIADKLQDCYAALGIVHTKYKHLP 303

Query: 289 GRFKDYIAIPKANGYQSLHTTLFGMHGVPIEIQIRTREMEEMANNGIAAHWLYKSNDDEQ 348
             F DY+A PK NGYQS+HT + G  G  IEIQIRT++M E +  G+AAHW YK      
Sbjct: 304 NEFDDYVANPKPNGYQSIHTVILGPEGKTIEIQIRTKQMHEESELGVAAHWKYKEGSSAA 363

Query: 349 PKGSHARARQWVKGILELQQRAGNSLEFIESVKIDLFPDEVYVFTPKGRIMELPKGSTAV 408
             G   +   W++ +L+ Q+   +S E ++ ++  +F D VY FTPKG +++LP G+T +
Sbjct: 364 RSGYDEKI-TWLRKLLDWQEEMSDSGEMLDELRSQVFDDRVYAFTPKGDVVDLPMGATPL 422

Query: 409 DFAYAVHTDVGNSCIACRINRRLAPLSEPLQSGSTVEIVSAPGARPNPAWLN----FVVS 464
           DFAY +H++VG+ CI  ++  R+ P +  LQ G  VEI++A    P+  WLN    FV S
Sbjct: 423 DFAYHIHSEVGHRCIGAKVAGRIVPFTHKLQMGDQVEIITAKEPNPSRDWLNPSLGFVHS 482

Query: 465 GKARTNIRHALKQQRRSESISLGERLLNKVLTGFDSSLEKIPQERIQSILAEYRLELIED 524
           G+AR  I    ++Q R +++  G  +L   L    ++L+          L  + +  +++
Sbjct: 483 GRARAKINAWFRKQSREKNLEAGREILEIELAKIGANLKHAE----AYALKRFNVNSVDE 538

Query: 525 LLEDIGLGNRMAYVVARRLLSAEGEQLPAPEGPLA---------------------IRGT 563
           +   IG G+     +   + +   +     E  LA                     + G 
Sbjct: 539 MYVGIGSGDLRINQIVNHINALVNKPTAEEEDKLALEKLQENKTLTPNRPHKDAVVVEGV 598

Query: 564 EGLVLSYAKCCTPIPGDPIVGHLSAGKGMVVHLENCRNISEIR-HNPEKCVQLSWAKDIT 622
           + L+   A+CC PIPGD I G+++ G+G+ VH  +C  + E+  H PE+ +   W     
Sbjct: 599 DNLMTHLARCCQPIPGDEIRGYITQGRGISVHRSDCEQLEELSLHAPERIIDTVWGSGFV 658

Query: 623 GEFNVELRVELEHQRGLIALLASSVNAADGNIEKISMDERDG---RISVVQLVVSVHDRV 679
           G + + +RVE   + GL+  + + +  A+  ++  SM  R     +I ++   + V++  
Sbjct: 659 GSYLLTVRVEAMERSGLLKDITTLL--ANEKVKVASMKSRSDYKRQIIIMDFDLEVNNVE 716

Query: 680 HLARVIKKLRTLTGVVRITRM 700
            LARV K++  +  V+ + R+
Sbjct: 717 ALARVSKRIEQIKDVMLVKRL 737