Pairwise Alignments

Query, 702 a.a., bifunctional (p)ppGpp synthase/hydrolase from Pseudomonas putida KT2440

Subject, 699 a.a., bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (RefSeq) from Shewanella amazonensis SB2B

 Score =  803 bits (2075), Expect = 0.0
 Identities = 387/697 (55%), Positives = 518/697 (74%), Gaps = 2/697 (0%)

Query: 5   EALAERLSTYLGPEQVNLVRRAYFYAEQAHDGQRRRSGEPYVTHPLAVASILADMHMDHQ 64
           E L E  S YL   QV L+++AY  A  AH+GQ R SGEPY+THP+AVA IL+DM +DH+
Sbjct: 5   EGLKESASAYLDSGQVALLKQAYQVARDAHEGQMRTSGEPYITHPVAVAKILSDMRLDHE 64

Query: 65  SLMAAMLHDVIEDTGIAKEALSQQFGETVAELVDGVSKLTQMNFETKAEAQAENFQKMAM 124
           +LMAA+LHD IEDT + KE L++ FG+ VA+LV+GVSKL ++ F  K EAQAENF+KM M
Sbjct: 65  TLMAALLHDTIEDTHVTKEDLAELFGDAVADLVEGVSKLDKLKFRDKKEAQAENFRKMMM 124

Query: 125 AMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKETLEIYAPIANRLGMHTVRVEFED 184
           AM +DIRVIL+KLADR HNMRTL  L  +KRRRIA+ETLEIYAPIANRLG+H ++ E ED
Sbjct: 125 AMTQDIRVILIKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLGIHNIKTELED 184

Query: 185 LGFKAMHPMRSSLIHRAVKSARGNRKEIVAKIEHSLANCLAADGIEGEVSGRQKHLYGIY 244
           LGF+A +PMR  ++   VK+ARGNRKE++  I+  +   L   GI  +V GR+K+LY IY
Sbjct: 185 LGFQAYYPMRYRVLKEVVKAARGNRKELIQNIKTGIQARLEDAGIHAKVKGREKNLYSIY 244

Query: 245 KKMRGKRRAFNEIMDVYAFRIIVDKVDTCYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQ 304
            KMRGK   F E+MD+YAFR+IVD +DTCYRVLGA+H LYKP PGRFKDYIAIPKANGYQ
Sbjct: 245 NKMRGKELQFQEVMDIYAFRVIVDSIDTCYRVLGAMHGLYKPRPGRFKDYIAIPKANGYQ 304

Query: 305 SLHTTLFGMHGVPIEIQIRTREMEEMANNGIAAHWLYKSNDDEQPKGSHARARQWVKGIL 364
           SLHT+LFG HGVP+EIQIRT +M++MA+ G+AAHW+YK+ ++     +  RAR+W++ +L
Sbjct: 305 SLHTSLFGPHGVPVEIQIRTDDMDQMADKGVAAHWVYKNGNENGSTTTQVRARKWMQSLL 364

Query: 365 ELQQRAGNSLEFIESVKIDLFPDEVYVFTPKGRIMELPKGSTAVDFAYAVHTDVGNSCIA 424
           ELQQ A +S EF+E+VK +LFPDE+YVFTP+GRI+ELP G+TAVDFAY VHTDVGN+C+ 
Sbjct: 365 ELQQSASSSFEFVENVKTELFPDEIYVFTPEGRILELPVGATAVDFAYEVHTDVGNTCVG 424

Query: 425 CRINRRLAPLSEPLQSGSTVEIVSAPGARPNPAWLNFVVSGKARTNIRHALKQQRRSESI 484
            R+NR+  PLS+PL SG TVEI++A GA+PN AWLNFVV+GKAR  IR  LK  ++ E+I
Sbjct: 425 ARVNRQAYPLSQPLISGQTVEIITAKGAKPNAAWLNFVVTGKARAKIRQVLKNLKQDEAI 484

Query: 485 SLGERLLNKVLTGFDSSLEKIPQERIQSILAEYRLELIEDLLEDIGLGNRMAYVVARRLL 544
           +LG RLLN  L   ++ L+ +  E +  ++ E + + +  LL DIGLGN M+ V+A+RL 
Sbjct: 485 ALGRRLLNHALG--ENKLDSVAPELLDKVIQETKHKDLNSLLADIGLGNAMSIVIAQRLT 542

Query: 545 SAEGEQLPAPEGPLAIRGTEGLVLSYAKCCTPIPGDPIVGHLSAGKGMVVHLENCRNISE 604
                +  +    + IRG EG+++S+AKCC PIPGD ++ H+S GKG+VVH+ENC NI  
Sbjct: 543 GGAVPEKQSETHLMPIRGAEGMLVSFAKCCHPIPGDAVIAHVSPGKGLVVHMENCANIRG 602

Query: 605 IRHNPEKCVQLSWAKDITGEFNVELRVELEHQRGLIALLASSVNAADGNIEKISMDERDG 664
            +  P+K + + W K    E+   LRVE+ + +G +A + S + +   NI  +S +ERDG
Sbjct: 603 YQGEPDKYIPVHWDKVDGVEYQANLRVEIVNHQGALAKITSIIASEGSNIHNLSTEERDG 662

Query: 665 RISVVQLVVSVHDRVHLARVIKKLRTLTGVVRITRMR 701
           R+ ++ L +SV DR+HLA V++++R L  V+R +R R
Sbjct: 663 RVYLINLRISVRDRIHLANVMRRIRVLPEVLRTSRNR 699