Pairwise Alignments

Query, 702 a.a., bifunctional (p)ppGpp synthase/hydrolase from Pseudomonas putida KT2440

Subject, 738 a.a., HD domain-containing protein from Parabacteroides merdae CL09T00C40

 Score =  317 bits (813), Expect = 1e-90
 Identities = 204/677 (30%), Positives = 350/677 (51%), Gaps = 44/677 (6%)

Query: 58  DMHMDHQSLMAAMLHDVIEDTGIAKEALSQQFGETVAELVDGVSKLTQMNFETKAEAQAE 117
           ++ +   S++A +L+  +    I  + +   F   V  ++  + K + + +       +E
Sbjct: 74  EIGLKRTSVIALLLYRPVMKKIITLDEVKTTFDADVTLIISRLLKTSDL-YARNTAVDSE 132

Query: 118 NFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSG-EKRRRIAKETLEIYAPIANRLGMH 176
           NF K+  + A D+RVIL+ +ADRL  MR  + L   E R+R+A E   +YAP+A+RLG++
Sbjct: 133 NFHKLLFSFAEDVRVILIMIADRLCLMRLGKQLKNDEDRKRLATEVSYLYAPLAHRLGLY 192

Query: 177 TVRVEFEDLGFKAMHPMRSSLIHRAVKSARGNRKEIVAKIEHSLANCLAADGIEGEVSGR 236
           T++ E EDL  K     +   I + +   + +R   +A+    + + L   G+  ++ GR
Sbjct: 193 TIKSELEDLSLKYTDRKQYDFIKQKLNETKRSRDAYIAEFITPIKSKLEEAGLRFDIKGR 252

Query: 237 QKHLYGIYKKMRGKRRAFNEIMDVYAFRIIVD-----KVDTCYRVLGAVHNLYKPLPGRF 291
            K ++ I  K++ +   F +I D++A RII+D     +   C++V   + ++Y+P P R 
Sbjct: 253 TKSIHSINNKLKKQNIPFEDIYDLFAIRIILDTPYEKERSDCWQVYSIITDMYQPNPKRM 312

Query: 292 KDYIAIPKANGYQSLHTTLFGMHGVPIEIQIRTREMEEMANNGIAAHWLYKSNDDEQPKG 351
           KD+I+IPK NGY+SLH T+ G     +E+QIRTR M+E+A  G+AAHW YK    E    
Sbjct: 313 KDWISIPKTNGYESLHITVMGPQNKWVEVQIRTRRMDEIAERGLAAHWKYKGGKAESGLD 372

Query: 352 SHARARQWVKGILELQQRAGNSLEFIESVKIDLFPDEVYVFTPKGRIMELPKGSTAVDFA 411
                   V+  LE ++   N L+ ++  K+DL+ DE+YVFTP G +++L KG+T +DFA
Sbjct: 373 EFLNT---VRAALETKEN--NPLDLMQDFKMDLYKDEIYVFTPTGELIKLAKGATVLDFA 427

Query: 412 YAVHTDVGNSCIACRINRRLAPLSEPLQSGSTVEIVSAPGARPNPAWLNFVVSGKARTNI 471
           +A+HT +G  C++ ++N +  P+   L +G TV IV+AP   P   WLN VV+ KAR  I
Sbjct: 428 FAIHTKLGCKCVSAKVNEKNVPIKYTLNNGDTVSIVTAPTQTPKRDWLNIVVTSKARVKI 487

Query: 472 RHALKQ-------------QRR--SESISLGERLLNKVL--TGFDSSLE---KIPQERI- 510
           + AL++             QRR  +  I + E +L + +   GF +  +   +I +ER+ 
Sbjct: 488 KQALREETAKAVDFAKEMLQRRFKNRKIEMEEPILMRYIKKKGFKTVTDFYVEIAEERLD 547

Query: 511 -QSILAEYRLELIEDLLEDIGLGNRMAYVVARR-LLSAEGEQLPAPEGPLAI-RGTEGLV 567
              ++ EY    +E L  +    +      A   + + E E++   +  L I +   G+ 
Sbjct: 548 PNQVIDEY----LEQLRRETETNDHTEVRSAEEYITTTEVEEISTNKDVLVIDKNLTGIE 603

Query: 568 LSYAKCCTPIPGDPIVGHLSAGKGMVVHLENCRNISEI-RHNPEKCVQLSWAKDITGEFN 626
              AKCC PI GD + G +S  +G+ +H  +C N  E+      + +Q  W+      + 
Sbjct: 604 YKLAKCCNPIYGDEVFGFVST-QGIKIHRMDCPNAQEMFSRFGYRIIQAKWSGKGDNGYI 662

Query: 627 VELRVELEHQRGLIALLASSVNAADG-NIEKISMDERDGRISVVQLVVSVHDRVHLARVI 685
           V LRV       ++  + S ++   G  +  +++D  DG I      V V D   L  + 
Sbjct: 663 VTLRVIGRDDIAIVTNITSVISKETGVTLRSLNIDSVDG-IFQGNFTVMVRDTTALNMLT 721

Query: 686 KKLRTLTGVVRITRMRT 702
           KK+  + GV  + R+ +
Sbjct: 722 KKINAVKGVKTVERLNS 738