Pairwise Alignments

Query, 702 a.a., bifunctional (p)ppGpp synthase/hydrolase from Pseudomonas putida KT2440

Subject, 735 a.a., GTP pyrophosphokinase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  400 bits (1028), Expect = e-115
 Identities = 222/686 (32%), Positives = 377/686 (54%), Gaps = 40/686 (5%)

Query: 48  HPLAVASILADMHMDHQSLMAAMLHDVIEDTGIAKEALSQQFGETVAELVDGVSKLTQMN 107
           H   +  ILA ++MD ++L AA+L  V +   + +EA+ ++FGE +A LV  V  +  + 
Sbjct: 57  HAREMIEILAPLNMDIETLQAAILFVVFDAGLLNEEAIKEKFGEPLARLVASVVTMNAIG 116

Query: 108 F------ETKAEAQAENFQKMAMAMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKE 161
                      E Q +N ++M +AM  D+R +++KLA+R+  +R ++    E R  +A+E
Sbjct: 117 ALKINPNSRSTEPQIDNIRRMLLAMVEDVRAVVIKLAERVCLLRAVKNADEETRVLLARE 176

Query: 162 TLEIYAPIANRLGMHTVRVEFEDLGFKAMHPMRSSLIHRAVKSARGNRKEIVAKIEHSLA 221
             +IYAP+ANRLG+  ++ E ED+ F+ +HP     I + +   R +R+  +      L 
Sbjct: 177 IADIYAPLANRLGIGQLKWELEDISFRYLHPDTYKEIAKQLDGKRLDREVFIENFVEQLQ 236

Query: 222 NCLAADGIEGEVSGRQKHLYGIYKKMRGKRRAFNEIMDVYAFRIIVDKVDTCYRVLGAVH 281
             L  D I  +V GR KH+Y I++KM+GK   F+E+ DV A RI+ +++  CY  LG VH
Sbjct: 237 QRLDEDHIRAKVYGRPKHIYSIWRKMKGKHLKFDELFDVRAVRIVTERLQDCYGALGVVH 296

Query: 282 NLYKPLPGRFKDYIAIPKANGYQSLHTTLFGMHGVPIEIQIRTREMEEMANNGIAAHWLY 341
            L+  +P  F DY+A PK NGYQS+HT + G  G  +EIQIRT++M E A  G+AAHW Y
Sbjct: 297 TLWHHIPREFDDYVANPKPNGYQSIHTVVVGPEGKTVEIQIRTQDMHEDAELGVAAHWKY 356

Query: 342 KSNDDEQPKGSHARARQWVKGILELQQRAGNSLEFIESVKIDLFPDEVYVFTPKGRIMEL 401
           K  +    +  +     W++ IL+ Q+    S   +E V+  +F D VYVFTP G +++L
Sbjct: 357 KEGNHSGKQSGYEEKINWLRKILQWQEDVVESGNLVEEVRSQVFEDRVYVFTPSGEVVDL 416

Query: 402 PKGSTAVDFAYAVHTDVGNSCIACRINRRLAPLSEPLQSGSTVEIVSAPGARPNPAWLN- 460
           P GST +DFAY +H+ VG+ CI  +++ R+ P +  +++G  +EI+++    P   WLN 
Sbjct: 417 PLGSTVLDFAYYIHSQVGHKCIGAKVDGRIVPFTYQVETGERIEIITSKHPNPKRDWLNP 476

Query: 461 ---FVVSGKARTNIRHALKQQRRSESISLGERLLNKVLTGFDSSLEKIPQERIQSILAEY 517
              ++ + +AR+ I+H  KQQ R ++I  G+ +L       ++ L ++      + +A  
Sbjct: 477 NLGYIRTSRARSKIQHWFKQQDRDKNIIAGKEML-------EAELARVSLRIKDATIAVE 529

Query: 518 RLEL--IEDLLEDIGLGNRMAYVVARRLLSA----EGEQLPAPE---------------G 556
           R  +  ++DLL  IG G+   + V   + S     E  +  A E               G
Sbjct: 530 RFNMASMDDLLAAIGGGDVRLHQVVNHIQSKLRLDEASEEDAVEELVKKSQSKSGTNSRG 589

Query: 557 PLAIRGTEGLVLSYAKCCTPIPGDPIVGHLSAGKGMVVHLENCRNISEI-RHNPEKCVQL 615
            + + G   L+   A+CC P+PGD I+G ++ G+G+ VH  +C  + E+ R +PE+ V +
Sbjct: 590 QVEVNGVGNLLSHIARCCQPVPGDEILGFITKGRGISVHRSDCEQVKELMRVHPERGVDV 649

Query: 616 SWAKDITGEFNVELRVELEHQRGLIALLASSVNAADGNIEKI-SMDERDGRISVVQLVVS 674
            W ++ +G + + LRV    + GL+  L S + A   N+  + S  +   + + ++L + 
Sbjct: 650 VWGENYSGGYRMRLRVLAHDRSGLLRDLTSVLAAEKSNVLAMSSSSDIKNQTAAIELELE 709

Query: 675 VHDRVHLARVIKKLRTLTGVVRITRM 700
           +++   L+RV+ KL  +  V+   R+
Sbjct: 710 LYNLDGLSRVLSKLSQVDSVIEARRL 735