Pairwise Alignments

Query, 702 a.a., bifunctional (p)ppGpp synthase/hydrolase from Pseudomonas putida KT2440

Subject, 701 a.a., guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  801 bits (2069), Expect = 0.0
 Identities = 391/699 (55%), Positives = 520/699 (74%), Gaps = 4/699 (0%)

Query: 5   EALAERLSTYLGPEQVNLVRRAYFYAEQAHDGQRRRSGEPYVTHPLAVASILADMHMDHQ 64
           E L E  S YL PEQV L+++AY  A  AH+GQ R SGEPY+THP+AVA ILA+M +DH+
Sbjct: 5   EGLKESASGYLEPEQVELLKQAYQVARDAHEGQMRTSGEPYITHPVAVARILAEMRLDHE 64

Query: 65  SLMAAMLHDVIEDTGIAKEALSQQFGETVAELVDGVSKLTQMNFETKAEAQAENFQKMAM 124
           +LMAA+LHD IEDT + KE L+++FGE+VAELV+GVSKL ++ F  K EAQAENF+KM M
Sbjct: 65  TLMAALLHDTIEDTYVTKEDLAERFGESVAELVEGVSKLDKLKFRDKKEAQAENFRKMMM 124

Query: 125 AMARDIRVILVKLADRLHNMRTLEVLSGEKRRRIAKETLEIYAPIANRLGMHTVRVEFED 184
           AM +DIRVIL+KLADR HNMRTL  L  +KRRRIA+ETLEIYAPIANRLG+H ++ E ED
Sbjct: 125 AMTQDIRVILIKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLGIHNIKTELED 184

Query: 185 LGFKAMHPMRSSLIHRAVKSARGNRKEIVAKIEHSLANCLAADGIEGEVSGRQKHLYGIY 244
           LGF+A +PMR  ++   VK+ARGNRKE++  IE ++   L   GI+G+V GR+K+LY IY
Sbjct: 185 LGFQAYYPMRYRVLKEVVKAARGNRKELIQGIEAAVLTRLNDAGIKGKVKGREKNLYSIY 244

Query: 245 KKMRGKRRAFNEIMDVYAFRIIVDKVDTCYRVLGAVHNLYKPLPGRFKDYIAIPKANGYQ 304
            KM+ K   F E+MD+YAFR+IVD +DTCYRVLGA+H LYKP PGRFKDYIAIPKANGYQ
Sbjct: 245 NKMQSKELQFQEVMDIYAFRVIVDSIDTCYRVLGAMHGLYKPRPGRFKDYIAIPKANGYQ 304

Query: 305 SLHTTLFGMHGVPIEIQIRTREMEEMANNGIAAHWLYKSN-DDEQPKGSHARARQWVKGI 363
           SLHT+LFG HGVP+EIQIRT +M++MA+ G+AAHW YK   +  Q   +  RAR+W++ +
Sbjct: 305 SLHTSLFGPHGVPVEIQIRTEDMDQMADKGVAAHWAYKGGAETGQGTTTQVRARKWMQSL 364

Query: 364 LELQQRAGNSLEFIESVKIDLFPDEVYVFTPKGRIMELPKGSTAVDFAYAVHTDVGNSCI 423
           LELQQ A  S EF+E+VK +LFP+E+YVFTP+GRI+ELP  +TAVDFAY VHTDVGN+C+
Sbjct: 365 LELQQSASTSFEFVENVKTELFPEEIYVFTPEGRILELPVNATAVDFAYEVHTDVGNTCV 424

Query: 424 ACRINRRLAPLSEPLQSGSTVEIVSAPGARPNPAWLNFVVSGKARTNIRHALKQQRRSES 483
             R+NR+  PLS+PL SG TVEI++A GARPN AWLNFVV+GKAR  IR  LK  +  ++
Sbjct: 425 GARVNRQAYPLSQPLISGQTVEIITAKGARPNAAWLNFVVTGKARAKIRQVLKSLKGDDA 484

Query: 484 ISLGERLLNKVLTGFDSSLEKIPQERIQSILAEYRLELIEDLLEDIGLGNRMAYVVARRL 543
           I+LG RLLN  L    + L+ IP E+I+ ++ + +   +  LL DIGLGN M+ V+A+RL
Sbjct: 485 IALGRRLLNHALG--KTKLDSIPAEQIEKVVRDTKHASLNALLADIGLGNAMSIVIAQRL 542

Query: 544 LSAEGEQLPAPEG-PLAIRGTEGLVLSYAKCCTPIPGDPIVGHLSAGKGMVVHLENCRNI 602
           +    E   + +   + IRG EG+++++A CC PIPGD ++ H+S GKG+VVH+ENC NI
Sbjct: 543 IGDNLENQESRDSHQMPIRGAEGMLVTFANCCRPIPGDAVIAHVSQGKGLVVHMENCANI 602

Query: 603 SEIRHNPEKCVQLSWAKDITGEFNVELRVELEHQRGLIALLASSVNAADGNIEKISMDER 662
              +  P+K + + W      E+   LRVE+ + +G +A + S + A   NI  +S +ER
Sbjct: 603 RGYQSEPDKYIPVQWDNVEGVEYQANLRVEIVNHQGALAKITSIIAAEGSNIHNLSTEER 662

Query: 663 DGRISVVQLVVSVHDRVHLARVIKKLRTLTGVVRITRMR 701
           DGR+ ++ L +SV DR+HLA V++++R L  V+R +R R
Sbjct: 663 DGRVYLINLRISVKDRIHLANVMRRIRVLPEVLRTSRNR 701