Pairwise Alignments

Query, 87 a.a., DNA-directed RNA polymerase subunit omega from Pseudomonas putida KT2440

Subject, 99 a.a., DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) from Xanthomonas campestris pv. campestris strain 8004

 Score = 72.4 bits (176), Expect = 1e-18
 Identities = 41/66 (62%), Positives = 51/66 (77%), Gaps = 3/66 (4%)

Query: 1  MARVTVEDCLEHVDNRFELVMLSTKRARQLATGGKEPRV--AWENDKPTVVALREIAEGI 58
          MAR+TVEDCLE V+NRFELVM+++KRARQLA  G +P +  A  +DKPTV+ALREIA   
Sbjct: 1  MARITVEDCLEVVNNRFELVMMASKRARQLA-NGVQPLIENADASDKPTVMALREIAARR 59

Query: 59 VTNEFI 64
          + N  I
Sbjct: 60 IDNALI 65