Pairwise Alignments

Query, 349 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 291 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 81.6 bits (200), Expect = 2e-20
 Identities = 59/237 (24%), Positives = 106/237 (44%), Gaps = 9/237 (3%)

Query: 69  LSLVLALERGRSLAKAAELLKVDVSTVFRSIRRLESALGTALFVKSRKGYLPTDTAQALA 128
           +S  +A+    +   AA+ L V  + V R I  LE+ LGT LF ++ +    T+      
Sbjct: 7   ISEFVAVAEAENFTLAAQRLNVSTAHVSRQIGALENRLGTKLFYRTTRKVSLTEEGTIYY 66

Query: 129 EQAERAEQALEAARIAMTSGEQVVSGTVRLTCTEAVMHSLLLPALAEFMSNYPALSLEMG 188
               + +  LE A  A+T  +    G V+LT   A     ++P L +FM  YP++   + 
Sbjct: 67  RHCRQLQTGLEEAERAITDLKDSPQGLVKLTAPVAYGEKFIMPLLNDFMVQYPSVECNVD 126

Query: 189 TSNTFANLSRRDADIALRLTNTPPEHLVGRNLGSTSYVVCGQPQWRERLSESPASVPWIA 248
            +N   +L     D+A+RL       L+ + L S ++ V   P + E+  E P ++  + 
Sbjct: 127 LTNRTLDLIEGGYDLAIRLGKLADSSLMAKPLSSRTHYVAASPSYVEKYGE-PHTLSELN 185

Query: 249 PDDSMQDHPTVVWRNQQHPGLSPRYQ------CSSMSTIAQLVMAGLGVAALPDYMV 299
             + +  +    WR  +H G    ++      C+S   +    + G+G+  LPDY +
Sbjct: 186 QHNCLIGNHN-YWRFIEH-GRERNFKVRGKLICNSGYALRDAALKGIGIVQLPDYYI 240