Pairwise Alignments

Query, 529 a.a., periplasmic dipeptide transport protein from Pseudomonas putida KT2440

Subject, 540 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  324 bits (830), Expect = 6e-93
 Identities = 178/499 (35%), Positives = 270/499 (54%)

Query: 27  CSEASPEGFDVVQYNSLTTTNATADVLMNRLVEFDAAQGKVVPSLATSWTVSADGLVYDF 86
           C E++P  F+    ++  T++A    + N L+  D      V SLA+SWTV++ GL Y F
Sbjct: 37  CGESAPTTFNPQLADNDITSDALGPQIYNTLLTIDPETHLPVASLASSWTVNSTGLEYVF 96

Query: 87  TLRDDVKFHSTSYFKPSRKLNADDVLFSFQRMLYPAHAWHKTAPGGYPHAQSLQLGSLIK 146
            LR DV F +T +F P+R LNADDV+FSF+R++ P + +HK     YP  + +   +L+ 
Sbjct: 97  KLRPDVAFQTTPWFSPTRPLNADDVVFSFRRIIDPTNPYHKVGQTQYPWFKGIDFQNLLV 156

Query: 147 AIEAPSPNTVRFTLSHPDATFLATLSMGFASIYSAEYADKLLKAGTPEKLNNQPIGTGPF 206
            + A    TV+F LS PD +FL+ ++   A I S EYA++L+     EKL+N P+GTGPF
Sbjct: 157 DVSALDDLTVKFVLSRPDNSFLSNIATSHAVILSLEYANQLIIDDEKEKLDNLPLGTGPF 216

Query: 207 VFQRFQKDAVVRYRANPDYFAGKPAVDPLIFAITTDANVRLQKLKRGECQVALSPKPLDI 266
               +    ++R + +P Y+ G   V+ ++F I+      L KL R EC V  +P    +
Sbjct: 217 YLAEYHPRDLIRLKRHPQYWEGAAKVEQVVFDISQRGTGMLAKLLRNECDVLNAPISSQL 276

Query: 267 AEAGQDGNLKVATTPAFMTAFVAINSQHPPLDKPEVRQAINLAFDRQAYLKAVFEDSAVA 326
               ++ ++ + TTPA   AF+A+N+QHP L+   VR+A+N A +RQ  L +V+  +   
Sbjct: 277 PAIEKNPDIVLQTTPAMNVAFIAVNTQHPALNDNRVRKALNFAINRQNILDSVYYGTGSI 336

Query: 327 ANGPYPPNTWSYAKDLPGYPLDLKKAKALLAKAGLAEGFSTTIWTRPSGSLLNPNPSLGA 386
           A    PP +W+Y +D      D   A+ALL +AG A G   T+         NP+P   A
Sbjct: 337 AFTILPPTSWAYQQDTAQIRYDRNYAQALLREAGFATGLELTMSVPVEPKAYNPSPRKTA 396

Query: 387 QMLQADLAKIGIKAEIRVIEWGELIRRAKAGEHDLLFMGWAGDNGDPDNFLSPQFSCAAV 446
           +++QA+LA IG+   +   +  E    +     DL   GW GD GDPDNFL P  SC + 
Sbjct: 397 ELIQANLADIGVTLRLISEDRSERQELSIRNNIDLYLSGWTGDTGDPDNFLRPLLSCDSN 456

Query: 447 ESGTNFARFCDSRLDQLISAGRTTNDQSVRSRLYQQAQTLIQQQALWVPLAHPTAATLLR 506
            +G N + +CDS  D L+      N    R  LY QAQ ++ Q+   +PLAH    T   
Sbjct: 457 RAGLNVSMWCDSDFDFLLDLALEANKPRYRLNLYHQAQNILNQEFPVIPLAHGIQFTAYS 516

Query: 507 QGVEGYQVSPFGRLDFSKV 525
           + + G ++SPF    F+ V
Sbjct: 517 KSLTGIRISPFNVQPFNTV 535