Pairwise Alignments

Query, 529 a.a., periplasmic dipeptide transport protein from Pseudomonas putida KT2440

Subject, 538 a.a., peptide-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  197 bits (501), Expect = 8e-55
 Identities = 148/480 (30%), Positives = 227/480 (47%), Gaps = 44/480 (9%)

Query: 53  LMNRLVEFDAAQGKVVPSLATSWTVSADGLVYDFTLRDDVKFHSTSYFKPSRKLNADDVL 112
           L + L+++     ++ P LA S+ +S DG ++ F LR  VKFH+       R+L A DV 
Sbjct: 58  LFDGLMDYVPGTTELRPDLAESYEISEDGKIFTFKLRKGVKFHN------GRELTAQDVK 111

Query: 113 FSFQRMLYPAHAWHKTAPGGYPHAQ-------SLQLGSLIKAIEAPSPNTVRFTLSHPDA 165
           +S +R++ PA      +PG    A        S   G  +  I    P+T+RF L+ PDA
Sbjct: 112 YSIERVVNPA----TQSPGAGFFATIKGVEEASAGKGGELSGITVQDPHTIRFELTRPDA 167

Query: 166 TFLATLSMGFASIYSAEYADKLLKAGTPEKLNNQPIGTGPFVFQRFQKDAVVRYRANPDY 225
           TFL  +++ FA +   E  +K             P+G+G F    +     + +    DY
Sbjct: 168 TFLHVMALNFAHVVPKEEVEK-----HGADFGKNPVGSGAFKLAEWTLGQRLVFERFTDY 222

Query: 226 F-AGKPAVDPLIFAITTDANVRLQKLKRGECQVALSP-KPLDIAEAGQDGNLK--VATTP 281
           +  G P +D + F +  +  V L +L+ GE  V      P    E   D N K  +    
Sbjct: 223 WNEGLPKLDRITFEVGQEPVVALLRLQNGEIDVPGDGIPPAKFVEVTNDPNFKDLIIRGG 282

Query: 282 AFMTAFVAINSQHPPLDKPEVRQAINLAFDRQAYLKAVFEDSAVAANGPYPPNTWSYAKD 341
              T +V +N +  P DK EVR+A+N+A ++   L+ +    AVAAN P PP+   YAKD
Sbjct: 283 QLHTGYVTMNVKMAPFDKVEVRKAVNMAINKDRILR-IINGRAVAANQPLPPSMPGYAKD 341

Query: 342 LPGYPLDLKKAKALLAKAGLAEGFSTTIWTRPSGSLLNPNPSLGAQMLQADLAKIGIKAE 401
             GY  D + AK LL +AGL +GFST ++   +    +P P + AQ +Q DL  IGI A 
Sbjct: 342 YAGYAYDPEGAKKLLEQAGLGDGFSTELYVMNT----DPQPRI-AQAIQQDLKAIGITAS 396

Query: 402 IRVIEWGELIRRAKAGEHDLLFMGWAG------DNGDPDNFLSPQFSC-AAVESGTNFAR 454
           I+ +    +I  A  GE +   M W+G      D  DP NF  P   C  AV  G N++ 
Sbjct: 397 IKSLAQANVI--AAGGEENQAPMIWSGGMAWIADFPDPSNFYGPILGCGGAVPGGWNWSW 454

Query: 455 FCDSRLDQLISAGRTTND---QSVRSRLYQQAQTLIQQQALWVPLAHPTAATLLRQGVEG 511
           +C+  LD+  +      D    + R  L++     I + A W P+ +    T+  + + G
Sbjct: 455 YCNEELDKKAAEADAIADPAKAAEREALWRDIYLKIMEDAPWAPIFNEERFTIRSERIGG 514