Pairwise Alignments

Query, 529 a.a., periplasmic dipeptide transport protein from Pseudomonas putida KT2440

Subject, 531 a.a., periplasmic dipeptide-binding protein from Sinorhizobium meliloti 1021

 Score =  418 bits (1074), Expect = e-121
 Identities = 221/528 (41%), Positives = 309/528 (58%), Gaps = 7/528 (1%)

Query: 7   SLLFTTLFA---AGAAQAAPLSVCSEASPEGFDVVQYNSLTTTNATADVLMNRLVEFDAA 63
           +LL  T  A   AG A +     CSE SPEGFD   Y + TT +A A  + +RL+EF   
Sbjct: 6   TLLAATAIATLMAGTAWSKTFVFCSEGSPEGFDPGLYTAGTTFDAAAHTVYSRLLEFKKG 65

Query: 64  QGKVVPSLATSWTVSADGLVYDFTLRDDVKFHSTSYFKPSRKLNADDVLFSFQRMLYPAH 123
             +  P LA SWT+S DGL Y F LR  VKF +T +F P+R+LNADDV+FS +R     H
Sbjct: 66  TTETEPGLAESWTISDDGLEYTFKLRPGVKFQTTEFFTPTRELNADDVIFSIERQWKSDH 125

Query: 124 AWHKTAPGG-YPHAQSLQLGSLIKAIEAPSPNTVRFTLSHPDATFLATLSMGFASIYSAE 182
            WH    GG + +   + L  L++++E     TV+  L   +A FLA L+M FASI S E
Sbjct: 126 PWHGYVTGGSWEYFAGMGLPELLESVEKVDDMTVKIKLKRKEAPFLANLAMPFASIMSKE 185

Query: 183 YADKLLKAGTPEKLNNQPIGTGPFVFQRFQKDAVVRYRANPDYFAGKPAVDPLIFAITTD 242
           YADKL   G   +LN  P+GTGPF F  +Q+DAV+RY+A+PD++ GK  +D L+FAITTD
Sbjct: 186 YADKLQAEGKMNQLNQMPLGTGPFAFVGYQQDAVIRYKAHPDFWGGKQKIDDLVFAITTD 245

Query: 243 ANVRLQKLKRGECQVALSPKPLDIAEAGQDGNLKVATTPAFMTAFVAINSQHPPLDKPEV 302
           A VR QKL+ GEC +   P   D+     D NLKV        A++A N+  PP DK EV
Sbjct: 246 AAVRFQKLQAGECHLMPYPNAADVEAMKADPNLKVMEQAGLNVAYLAYNTTQPPFDKVEV 305

Query: 303 RQAINLAFDRQAYLKAVFEDSAVAANGPYPPNTWSYAKDLPGYPLDLKKAKALLAKAGLA 362
           R+A+N A ++QA + AVF+  A  A  P PP  WSY + +     D + AK +L  AG+ 
Sbjct: 306 RKALNKAINKQAIVDAVFQGQATPATNPIPPTMWSYNEHIEDDTYDPEAAKKMLEDAGVK 365

Query: 363 EGFSTTIWTRPSGSLLNPNPSLGAQMLQADLAKIGIKAEIRVIEWGELIRRAKAGEHD-L 421
           +  S  +W  P       N    A+++QAD AK+G+K EI   EW E + ++KA + D  
Sbjct: 366 D-LSMKVWAMPVARPYMLNARRAAELMQADFAKVGVKVEIVSYEWAEYLEKSKAKDRDGA 424

Query: 422 LFMGWAGDNGDPDNFLSPQFSCAAVESGTNFARFCDSRLDQLISAGRTTNDQSVRSRLYQ 481
           + +GW GDNGDPDNFL     C AV  G N A++CD   D+L++  +  +D + R++LY+
Sbjct: 425 VILGWTGDNGDPDNFLDTLLGCDAV-GGNNRAQWCDKEFDELVTKAKEASDVAERTKLYE 483

Query: 482 QAQTLIQQQALWVPLAHPTAATLLRQGVEGYQVSPFGRLDFSKVTVTK 529
           +AQ + +++A W  L H  +   +R+ VEG+  SP G   F  V + +
Sbjct: 484 EAQVVFKREAPWATLDHSLSIVPMRKNVEGFVQSPLGDFAFDGVDIVE 531