Pairwise Alignments

Query, 529 a.a., periplasmic dipeptide transport protein from Pseudomonas putida KT2440

Subject, 530 a.a., peptide ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

 Score =  456 bits (1173), Expect = e-132
 Identities = 235/526 (44%), Positives = 321/526 (61%)

Query: 2   RVAALSLLFTTLFAAGAAQAAPLSVCSEASPEGFDVVQYNSLTTTNATADVLMNRLVEFD 61
           R   L+L    L A+ A  A  L  CSE SPE F+   Y S T+ +A+A  + NRLV+F 
Sbjct: 4   RFTTLALALAALTASSAISAKTLVYCSEGSPENFNPQLYTSGTSVDASAVPVYNRLVDFK 63

Query: 62  AAQGKVVPSLATSWTVSADGLVYDFTLRDDVKFHSTSYFKPSRKLNADDVLFSFQRMLYP 121
           A   ++VPSLA SW VS DG VY F LR  VKF S  YFKPSR  NADDV+FSF R   P
Sbjct: 64  AGTTELVPSLAESWEVSEDGKVYIFHLRKGVKFQSNKYFKPSRDFNADDVIFSFMRQKDP 123

Query: 122 AHAWHKTAPGGYPHAQSLQLGSLIKAIEAPSPNTVRFTLSHPDATFLATLSMGFASIYSA 181
            H +H  + G Y + +SL+ G LI AI+ P   TVRFTL+H +A F+A L+  FASI SA
Sbjct: 124 QHPYHNISSGNYSNFESLEFGQLITAIDKPDEYTVRFTLAHAEAPFVADLAWYFASILSA 183

Query: 182 EYADKLLKAGTPEKLNNQPIGTGPFVFQRFQKDAVVRYRANPDYFAGKPAVDPLIFAITT 241
           EYAD +LKAGTPE+++  PIGTGPF   ++QKD+ + + A P+Y+ GK  +D LIF+IT 
Sbjct: 184 EYADAMLKAGTPERVDMDPIGTGPFKLAQYQKDSRILFTAFPEYWQGKAHIDRLIFSITP 243

Query: 242 DANVRLQKLKRGECQVALSPKPLDIAEAGQDGNLKVATTPAFMTAFVAINSQHPPLDKPE 301
           DA+VR  KL++ ECQV   P P D+    ++  + + +     T F+A N+Q  PLD  +
Sbjct: 244 DASVRYAKLEKNECQVMPFPNPADLPRMKENKAINLMSKAGLNTGFLAFNTQKAPLDNVK 303

Query: 302 VRQAINLAFDRQAYLKAVFEDSAVAANGPYPPNTWSYAKDLPGYPLDLKKAKALLAKAGL 361
           VRQA+ +A ++ A ++AVF  +  AA    PP  WS    L  Y  D +KAKALLA++G+
Sbjct: 304 VRQALAMAINKPAIIEAVFHGTGTAAKNLLPPGVWSANSQLKDYEYDPQKAKALLAESGV 363

Query: 362 AEGFSTTIWTRPSGSLLNPNPSLGAQMLQADLAKIGIKAEIRVIEWGELIRRAKAGEHDL 421
           A   S  +W  P     NPN    A+M+QAD AKIG++ +I   EWGE ++R K GEH  
Sbjct: 364 AGPISIDLWAMPVQRPYNPNAKRMAEMIQADWAKIGVQTKITTYEWGEYLKRVKDGEHQA 423

Query: 422 LFMGWAGDNGDPDNFLSPQFSCAAVESGTNFARFCDSRLDQLISAGRTTNDQSVRSRLYQ 481
             MGW    GDPDNF  P F+C +   G+N A++C    D++I+  ++  D+  R  LY 
Sbjct: 424 ALMGWTTATGDPDNFFGPLFTCQSANGGSNSAKWCYQPFDKIIAEAKSITDRQKREALYL 483

Query: 482 QAQTLIQQQALWVPLAHPTAATLLRQGVEGYQVSPFGRLDFSKVTV 527
           QAQ ++  Q   V +AH T    +R+ V GY++ PFG+  F +V +
Sbjct: 484 QAQQMMHDQMPAVMIAHSTIFEPVRKNVSGYEIDPFGKHIFYQVDI 529