Pairwise Alignments

Query, 529 a.a., periplasmic dipeptide transport protein from Pseudomonas putida KT2440

Subject, 542 a.a., ABC transporter from Burkholderia phytofirmans PsJN

 Score =  468 bits (1205), Expect = e-136
 Identities = 244/530 (46%), Positives = 322/530 (60%), Gaps = 14/530 (2%)

Query: 11  TTLFAAGAAQAAPLSV------------CSEASPEGFDVVQYNSLTTTNATADVLMNRLV 58
           TTL AA AA     SV            CSE SP GFD  QY + T   A    + NRLV
Sbjct: 13  TTLVAAAAASMVGASVARAEIPNKTLVYCSEGSPAGFDPAQYTTGTDFTANTFTVYNRLV 72

Query: 59  EFDAAQGKVVPSLATSWTVSADGLVYDFTLRDDVKFHSTSYFKPSRKLNADDVLFSFQRM 118
           EF+    KV P LA  W VSADG  Y F LR  VKF +TS+FKP+R+ NADDV+F+FQRM
Sbjct: 73  EFERGGTKVEPGLAEKWDVSADGKTYTFHLRHGVKFQTTSFFKPTREFNADDVVFTFQRM 132

Query: 119 LYPAHAWHKTAPGGYPHAQSLQLGSLIKAIEAPSPNTVRFTLSHPDATFLATLSMGFASI 178
           L P  A+HK  P  +P+   + L  LI  +E   P TV+FTL   +A F+  L+M +ASI
Sbjct: 133 LDPNSAFHKAYPVQFPYFTDMGLDKLITGVEKVDPYTVKFTLKEVNAPFIQNLAMEYASI 192

Query: 179 YSAEYADKLLKAGTPEKLNNQPIGTGPFVFQRFQKDAVVRYRANPDYFAGKPA-VDPLIF 237
            S+EY D+L+KAG    +N  P+GTGPF+F+ + KDA +R+  NPDY+      +  LIF
Sbjct: 193 LSSEYGDQLMKAGKAADINQFPVGTGPFIFKSYTKDATIRFDGNPDYWKPNTVKISKLIF 252

Query: 238 AITTDANVRLQKLKRGECQVALSPKPLDIAEAGQDGNLKVATTPAFMTAFVAINSQHPPL 297
           +IT DA VR+QK+KR ECQV   P+P DIA    + N+ + + P F   ++A N  H P+
Sbjct: 253 SITPDAGVRVQKIKRDECQVMSYPRPADIAPLKAEANIAMPSQPGFNLGYLAYNVSHKPV 312

Query: 298 DKPEVRQAINLAFDRQAYLKAVFEDSAVAANGPYPPNTWSYAKDLPGYPLDLKKAKALLA 357
           DK EVRQA+++A +++A + +V++ +  AA  P PP  WSY K+L G   D  KAKALLA
Sbjct: 313 DKVEVRQALDMAINKKAIIDSVYQGAGQAATNPMPPTQWSYDKNLKGAAYDTDKAKALLA 372

Query: 358 KAGLAEGFSTTIWTRPSGSLLNPNPSLGAQMLQADLAKIGIKAEIRVIEWGELIRRAKAG 417
           KAG   GF  T+W  P     NPN  L A+M+QAD AKIG+KA+I   EWGE I+RA AG
Sbjct: 373 KAGYPNGFDITLWAMPVQRAYNPNARLMAEMIQADWAKIGVKAKIVTYEWGEYIKRAHAG 432

Query: 418 EHDLLFMGWAGDNGDPDNFLSPQFSCAAVESGTNFARFCDSRLDQLISAGRTTNDQSVRS 477
           E D + +GW GDNGDPDN+L     C AV +G NF+++C    D LI  GR T+DQ  R+
Sbjct: 433 EDDTMLIGWTGDNGDPDNWLGTLLGCEAV-NGNNFSKWCYKPFDDLIQKGRVTSDQGART 491

Query: 478 RLYQQAQTLIQQQALWVPLAHPTAATLLRQGVEGYQVSPFGRLDFSKVTV 527
             Y QAQ +  QQ  + P+AH T    + + V   ++ P G   F  V++
Sbjct: 492 TAYMQAQQIFAQQLPFSPIAHSTVYQPVSKKVVDMRIEPLGYARFDGVSI 541