Pairwise Alignments

Query, 555 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 1258 a.a., Serine hydroxymethyltransferase (EC 2.1.2.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  308 bits (788), Expect = 1e-87
 Identities = 174/440 (39%), Positives = 260/440 (59%), Gaps = 9/440 (2%)

Query: 110  VRERGVLVATLQRLAEQDPLTGIANRQGFQALLNARL--AENEGRGVALGHLDLDNFRHV 167
            + ER      + RLA  D LT + NR  FQ  L+  L  A+ +   V L  LDLD F+ +
Sbjct: 809  ISERKASEQRIHRLAYYDALTHLPNRTLFQDRLHTALQSADRQKTWVVLMFLDLDRFKPI 868

Query: 168  NDALGHQSGDRLILQVVARLKHQLEAGDQLARLGSDEFALLIDTRRDA----NRAEWIAE 223
            ND+LGH +GDR++ ++  RL   +   D +AR+G DEF LL+  R       NRA  +AE
Sbjct: 869  NDSLGHAAGDRMLKEMATRLLGCVADDDTVARMGGDEFTLLLQPRASREMALNRAINVAE 928

Query: 224  RIVEALAEPYWIDGESLLLGCSLGIAHARAQSGAD--PLMWHAHIAMRQAKGSQGCTFHV 281
            +I+ +L  P+ ++G    +  S+GIA +  Q G +   LM +A  AM  AK      F  
Sbjct: 929  QILASLVRPFVLEGREFFVTASIGIALS-PQDGNELSQLMKNADTAMYHAKERGKNNFQF 987

Query: 282  FNERINRNARSLADLESELRRALRRDELELHYQPRLNLADGRIVGLEALVRWRHAERGLL 341
            +   +N +A    +LES+LR AL ++E  L+YQP+ +    R+ G EAL+RWRH  RGL+
Sbjct: 988  YQADMNASALERLELESDLRHALEQNEFVLYYQPQFSGDGKRLTGAEALLRWRHPRRGLV 1047

Query: 342  PPSEFVPLAEQSGLIVPLGYWVISRALRDMQALCERGLEPLHMAVNLSFRQFQDSQLLAT 401
            PP +F+P+ E+ GL+V +G WVI+ A R ++   +  +    ++VN+S RQF D QL   
Sbjct: 1048 PPGDFIPVLEELGLVVDVGDWVITEACRQLRTWHQAKVRVPKVSVNISARQFSDGQLGTR 1107

Query: 402  LSRLILEHGVDARWLEFELTETAVMRRNEVVRQTMDALGRLGVRFSLDDFGTGFSSFVHL 461
            ++ ++   G+    LE ELTE+ +MR      Q +  L  LG+  ++DDFGTG+SS  +L
Sbjct: 1108 IANILRSTGLPPACLELELTESILMREVSEAMQILAGLKNLGLSIAVDDFGTGYSSLNYL 1167

Query: 462  NSLPITLLKVDRSFVAEMEMREENRKLVHAMINLAHNLNLEVVAEGVESEEQLTLLRGFG 521
               PI +LK+DR+FV  +   E++ ++  A+I +AH+LNL V+AEGVE+ EQL  LR  G
Sbjct: 1168 KQFPIDVLKIDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREHG 1227

Query: 522  CDQVQGFLVSRPLPIGELMA 541
            CD+VQG+L  RP+P     A
Sbjct: 1228 CDEVQGYLFGRPMPANRFEA 1247



 Score = 27.7 bits (60), Expect = 0.003
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 150 EGRGVALGHLDLDNFRHVNDALGHQSGDRLILQVVARLKHQLE 192
           EG GVAL  LDL   +   +  G  +GD+  L+   +  HQLE
Sbjct: 278 EGTGVALCVLDLSGLKAFFERAGLHTGDQ--LRAWTKTPHQLE 318