Pairwise Alignments

Query, 555 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 684 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

 Score =  289 bits (740), Expect = 2e-82
 Identities = 168/423 (39%), Positives = 254/423 (60%), Gaps = 3/423 (0%)

Query: 118 ATLQRLAEQDPLTGIANRQGFQALLNARLAENEGRGVALGHLDLDNFRHVNDALGHQSGD 177
           AT Q  A  D LTG+ NR GF   L  +  +NE   V L +LD+DNF+++ND+LGH  GD
Sbjct: 250 ATTQVDAHIDSLTGLYNRHGFTKRLE-QCIQNETPLVML-YLDIDNFKNINDSLGHHIGD 307

Query: 178 RLILQVVARLKHQLEAGDQLARLGSDEFALLIDTRRDANRAEWIAERIVEALAEPYWIDG 237
           ++I +V ARLK  L     L  LG DEF L++        AE +A+RI+  + +P+ +  
Sbjct: 308 KVIKEVAARLKRLLPQQAVLGHLGGDEFGLILPEPEHNRSAEMLADRIISLINQPFDLHH 367

Query: 238 ESLLLGCSLG-IAHARAQSGADPLMWHAHIAMRQAKGSQGCTFHVFNERINRNARSLADL 296
            S  L CS+G + +    + A  L+ +A  AM +AK         FN+++N+ AR    L
Sbjct: 368 FSKRLACSIGSVRYPGDGNDARVLLQNADTAMYEAKERGRNRLIKFNDQMNKEARMRLWL 427

Query: 297 ESELRRALRRDELELHYQPRLNLADGRIVGLEALVRWRHAERGLLPPSEFVPLAEQSGLI 356
           E EL++AL+++ LE+ YQP++N  D  I G EALVRW+H   G + P  F+P+AE++GLI
Sbjct: 428 EIELQKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEGYISPGAFIPVAEKAGLI 487

Query: 357 VPLGYWVISRALRDMQALCERGLEPLHMAVNLSFRQFQDSQLLATLSRLILEHGVDARWL 416
             LG  V+      ++    +G+ P  +A+N+S  QF + QL+  L +L+   G+D   +
Sbjct: 488 EHLGRVVMREVFATVKRWKLQGILPGRVAINISPEQFGNPQLIDYLEKLLRTTGLDPNNI 547

Query: 417 EFELTETAVMRRNEVVRQTMDALGRLGVRFSLDDFGTGFSSFVHLNSLPITLLKVDRSFV 476
            FELTE+AVM  +E  +Q ++A+ +LG   S+DDFGTG+SS  +L   PI  LK+DR+F+
Sbjct: 548 TFELTESAVMSDSEHTQQMLNAIKKLGFTLSIDDFGTGYSSLAYLARFPIDELKIDRAFI 607

Query: 477 AEMEMREENRKLVHAMINLAHNLNLEVVAEGVESEEQLTLLRGFGCDQVQGFLVSRPLPI 536
           + ++   +   ++  +INL  +LNL VVAEGVE+++Q TLL    C  +QGF   RP P 
Sbjct: 608 SNIDTLPKQLTVIENIINLGRSLNLTVVAEGVETQQQATLLSNLNCHSIQGFHFYRPQPK 667

Query: 537 GEL 539
            E+
Sbjct: 668 HEV 670