Pairwise Alignments

Query, 555 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 929 a.a., response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Synechococcus elongatus PCC 7942

 Score =  294 bits (753), Expect = 9e-84
 Identities = 154/431 (35%), Positives = 252/431 (58%), Gaps = 3/431 (0%)

Query: 124 AEQDPLTGIANRQGFQALLN--ARLAENEGRGVALGHLDLDNFRHVNDALGHQSGDRLIL 181
           A  D LTG+ NR   +  L    ++A  +   +A+  +DLD F+ +ND++GH+SGD L++
Sbjct: 498 ASHDVLTGLPNRAVLEDRLRQGCKMALRQKHSLAILFIDLDGFKLINDSIGHRSGDLLLV 557

Query: 182 QVVARLKHQLEAGDQLARLGSDEFALLIDTRRDANRAEWIAERIVEALAEPYWIDGESLL 241
           +V  R+  Q+ AGD +AR+G DEF +L+   +  N    IA+R++ ++A PY I G  L 
Sbjct: 558 EVAQRMCEQVRAGDTVARIGGDEFIILLVDLKLENDVISIADRLLASVARPYHIQGIYLH 617

Query: 242 LGCSLGIAHARAQ-SGADPLMWHAHIAMRQAKGSQGCTFHVFNERINRNARSLADLESEL 300
           +  S+GI  +         L+  A +AM +AK      +  +   +N   R    L +EL
Sbjct: 618 VTASMGITLSDGDIEQPTQLIQQADLAMYKAKQEGRNNYQWYTNDLNLRLRERVHLRNEL 677

Query: 301 RRALRRDELELHYQPRLNLADGRIVGLEALVRWRHAERGLLPPSEFVPLAEQSGLIVPLG 360
           ++A+  +  EL++QP++    G+++GLEAL+RW+H + G + P+ FVP+AE +G I+PL 
Sbjct: 678 QKAIETEAFELYFQPKIEGCSGQVIGLEALLRWQHPQMGFISPATFVPIAEDTGQIIPLS 737

Query: 361 YWVISRALRDMQALCERGLEPLHMAVNLSFRQFQDSQLLATLSRLILEHGVDARWLEFEL 420
            WV+  A R ++ L ++G+    +AVN+S  QF+    + ++   + ++ + +  LE E+
Sbjct: 738 QWVLETACRQLRDLLQQGIAAPSVAVNISTVQFRRINFVKSVQSALQKYQLKSEHLEIEI 797

Query: 421 TETAVMRRNEVVRQTMDALGRLGVRFSLDDFGTGFSSFVHLNSLPITLLKVDRSFVAEME 480
           TE  +    E   + +  L  LGV  S+DDFGTGFSS  +L  LPI  +K+DRSFV E+ 
Sbjct: 798 TENVLFDNTEKAIEKLQRLKELGVNISIDDFGTGFSSLSYLKELPIDTVKIDRSFVQEIN 857

Query: 481 MREENRKLVHAMINLAHNLNLEVVAEGVESEEQLTLLRGFGCDQVQGFLVSRPLPIGELM 540
               +  +   +I++AH+L L VVAEGVE+E+Q   L+   CDQ QG+  ++P+P   L 
Sbjct: 858 TDSRDAAITQGIISMAHHLRLNVVAEGVETEQQFKFLQQSNCDQYQGYYFAKPMPFEALK 917

Query: 541 AYLLQAPGRQL 551
            YL+    R+L
Sbjct: 918 QYLMDEAAREL 928



 Score = 26.9 bits (58), Expect = 0.004
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)

Query: 81  EPEAAPSAVSDWLVRDQLNADTLRRSLRHVRERGVLVATLQRLAEQD 127
           +  A     +D+LV+ QL+   L RS+R+  +R +      RLAE +
Sbjct: 97  DASAIELGAADYLVKGQLDCQQLLRSIRYAIDRNLATT---RLAESE 140