Pairwise Alignments

Query, 555 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 855 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  294 bits (753), Expect = 8e-84
 Identities = 167/426 (39%), Positives = 249/426 (58%), Gaps = 4/426 (0%)

Query: 124 AEQDPLTGIANRQGFQALLNARL--AENEGRGVALGHLDLDNFRHVNDALGHQSGDRLIL 181
           A  D LT + NR      L   +  A+  GR V +  LDLD F+ +ND+ GH +GD ++ 
Sbjct: 413 ANFDMLTHLPNRHLIMDRLEQAMHQAQRTGRQVCVMFLDLDRFKQINDSYGHSAGDEVLK 472

Query: 182 QVVARLKHQLEAGDQLARLGSDEFALLIDTRRDANRAEWIAERIVEALAEPYWIDGESLL 241
               RL++ +   D + RLG DEF +++    D +   +IAE+I+ +L+EP+ I G  + 
Sbjct: 473 LTARRLRNCVRISDSVGRLGGDEFIVILSNVEDQHAGAYIAEKILYSLSEPFPIGGTEVF 532

Query: 242 LGCSLGIAHARAQSGADP-LMWHAHIAMRQAKGSQGCTFHVFNERINRNARSLADLESEL 300
              S+GI +        P L+ +A +AM  AK      + +F   + R + +L  +ES+L
Sbjct: 533 CIPSVGITYFPDHGETAPDLLRNADVAMYHAKQGGERRYAIFTPDMARRSLALLTMESDL 592

Query: 301 RRALRRDELELHYQPRLNLADGRIVGLEALVRWRHAERGLLPPSEFVPLAEQSGLIVPLG 360
           R AL RDE ELH+QP++  AD  ++G EAL+RWRH E+GL+ P +F+PLAE+SGLI+P+G
Sbjct: 593 RHALARDEFELHFQPKVR-ADLTLIGAEALIRWRHPEKGLINPGDFIPLAEESGLILPIG 651

Query: 361 YWVISRALRDMQALCERGLEPLHMAVNLSFRQFQDSQLLATLSRLILEHGVDARWLEFEL 420
            W +  A   + +    GL    ++VN+S RQFQD  L+ T+ ++++E G++   L+ E+
Sbjct: 652 RWTLREACDRVMSWRAEGLTIPSVSVNVSPRQFQDQTLVETVRQILVETGLEPEALDLEI 711

Query: 421 TETAVMRRNEVVRQTMDALGRLGVRFSLDDFGTGFSSFVHLNSLPITLLKVDRSFVAEME 480
           TET +    E    T+ AL  LGV  S+DDFGTG+SS  +L + PI  LK+D++FV ++ 
Sbjct: 712 TETVMTGDVEHAVGTLRALKDLGVTLSIDDFGTGYSSLNYLKTFPIDTLKIDQTFVRDVL 771

Query: 481 MREENRKLVHAMINLAHNLNLEVVAEGVESEEQLTLLRGFGCDQVQGFLVSRPLPIGELM 540
              ++  +V  +I LA NL   VVAEGVE  EQ   L    C   QGFL SRPLP  E  
Sbjct: 772 HSGKDAAIVSTIIALARNLGFSVVAEGVEEIEQAEFLGSRDCQNFQGFLYSRPLPPAEFT 831

Query: 541 AYLLQA 546
            +L  A
Sbjct: 832 TFLRTA 837