Pairwise Alignments

Query, 555 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 714 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  317 bits (811), Expect = 1e-90
 Identities = 179/445 (40%), Positives = 267/445 (60%), Gaps = 11/445 (2%)

Query: 110 VRERGVLVATLQRLAEQDPLTGIANRQGF-----QALLNARLAENEGRGVALGHLDLDNF 164
           + ER    A +  LA  D LT + NR  F     QAL++AR  +   + VAL  +DLD F
Sbjct: 265 ISERKEAEARIHYLAHYDALTDLPNRVLFNDRFTQALIHARRYD---QSVALMFVDLDRF 321

Query: 165 RHVNDALGHQSGDRLILQVVARLKHQLEAGDQLARLGSDEFALLIDTRRDANRAEWIAER 224
           + VND LGH+ GD L+ QV  RL+  +   D ++R G DEF +L+     +  A  ++++
Sbjct: 322 KVVNDTLGHRVGDELLKQVAERLRRCVREEDTVSRQGGDEFVVLLANLDMSADAAVVSDK 381

Query: 225 IVEALAEPYWIDGESLLLGCSLGIAHARAQSGADP--LMWHAHIAMRQAKGSQGCTFHVF 282
           I+EALAEP + +G  L + CS+GIA      GADP  LM +A +AM +AK      +  F
Sbjct: 382 ILEALAEPMYFEGHELSVTCSIGIA-CYPSDGADPDTLMKNADLAMYRAKSVGRNNYQFF 440

Query: 283 NERINRNARSLADLESELRRALRRDELELHYQPRLNLADGRIVGLEALVRWRHAERGLLP 342
           +  + + A +   LE+ +RRAL RDE ELHY P+++   GR++ LEAL+RW+H ERGLL 
Sbjct: 441 SPELEQGALTRLTLENAMRRALDRDEFELHYLPQVDNPSGRLLSLEALIRWQHPERGLLL 500

Query: 343 PSEFVPLAEQSGLIVPLGYWVISRALRDMQALCERGLEPLHMAVNLSFRQFQDSQLLATL 402
           PS+F+PLAE+SGL++P+  WV+ R  R +     + L  + +A+NL   Q +       L
Sbjct: 501 PSQFIPLAEESGLVLPISLWVLRRVARQLADWRRQNLTLVPVAINLCEAQLRQPDFAEAL 560

Query: 403 SRLILEHGVDARWLEFELTETAVMRRNEVVRQTMDALGRLGVRFSLDDFGTGFSSFVHLN 462
            R++ E GV+ RW+E E TE A+M   E   + + AL RLGV  +LDDFG G+S+   L 
Sbjct: 561 GRILSEEGVEGRWIELEFTEGALMHDTERNLRVLSALKRLGVGITLDDFGVGYSNLNVLR 620

Query: 463 SLPITLLKVDRSFVAEMEMREENRKLVHAMINLAHNLNLEVVAEGVESEEQLTLLRGFGC 522
            LP+  LK+DRS V ++   E++  +V A+I++A ++NL+VVAEGVE+ +Q    +   C
Sbjct: 621 RLPVDTLKIDRSLVTDVTRNEDDAVIVDAIISMAQSMNLKVVAEGVETADQAGFFKARAC 680

Query: 523 DQVQGFLVSRPLPIGELMAYLLQAP 547
            ++QG   S+ +   E+ A L  AP
Sbjct: 681 AEIQGHFFSKAIGAVEVAAMLGHAP 705