Pairwise Alignments

Query, 555 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 640 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  326 bits (835), Expect = 2e-93
 Identities = 184/431 (42%), Positives = 263/431 (61%), Gaps = 11/431 (2%)

Query: 120 LQRLAEQDPLTGIANRQGFQALLNARLAENEGRG------VALGHLDLDNFRHVNDALGH 173
           ++ LA  DPLT + NR     LL  R  + +G+       VA+  LDLD+F+ VND LGH
Sbjct: 211 IEYLAHHDPLTDLPNR----VLLRDRFLQAQGQAARSANRVAILFLDLDHFKLVNDTLGH 266

Query: 174 QSGDRLILQVVARLKHQLEAGDQLARLGSDEFALLIDTRRDANRAEWIAERIVEALAEPY 233
             GDRL+  V  RL+  +   D ++R G DEF +++    D   A  IA +++E + EP 
Sbjct: 267 PIGDRLLQAVAERLRRGVRETDTISRQGGDEFVIVLPELADPESAGSIAGKLMEQMHEPV 326

Query: 234 WIDGESLLLGCSLGIA-HARAQSGADPLMWHAHIAMRQAKGSQGCTFHVFNERINRNARS 292
            ++G  L +  SLGIA +       D LM  A  AM  AK +   T   F   +N  A +
Sbjct: 327 RVNGHRLNVTFSLGIALYPDDGEDFDTLMKKADTAMYSAKEAGRNTLRFFTAAMNVEAAA 386

Query: 293 LADLESELRRALRRDELELHYQPRLNLADGRIVGLEALVRWRHAERGLLPPSEFVPLAEQ 352
              L++ L+RAL ++EL L+YQP+ +LA GRI+G EAL+RWR  ERGL+PP EF+P+AE 
Sbjct: 387 RLKLQNRLQRALEKEELVLYYQPQFDLASGRILGTEALLRWRDPERGLVPPGEFIPVAED 446

Query: 353 SGLIVPLGYWVISRALRDMQALCERGLEPLHMAVNLSFRQFQDSQLLATLSRLILEHGVD 412
           +GLI P+G WVI  A R+++   E G   L MAVNLS  QF+ S+L+   +R + E+ + 
Sbjct: 447 TGLIGPIGEWVIGEACRELRRWHEAGATDLTMAVNLSPVQFRRSRLVEIAARALQENRLP 506

Query: 413 ARWLEFELTETAVMRRNEVVRQTMDALGRLGVRFSLDDFGTGFSSFVHLNSLPITLLKVD 472
           A  LEFELTE+ ++R +  + +T+ AL  LGV+ S+DDFGTG+SS  +L    +  LK+D
Sbjct: 507 AECLEFELTESLLIREDAAILETLTALKGLGVKLSIDDFGTGYSSLAYLKRFNVDKLKID 566

Query: 473 RSFVAEMEMREENRKLVHAMINLAHNLNLEVVAEGVESEEQLTLLRGFGCDQVQGFLVSR 532
           +SF+ E+    ++  +V A+I +A  L L  VAEGVE+ EQ T+LR F CD+VQGFL  R
Sbjct: 567 QSFIRELCSNPDDEAIVSAVITMARQLRLRTVAEGVENAEQATMLRRFDCDEVQGFLFGR 626

Query: 533 PLPIGELMAYL 543
           P+P  +  A L
Sbjct: 627 PMPAADFQALL 637