Pairwise Alignments

Query, 555 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 999 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  314 bits (804), Expect = 1e-89
 Identities = 178/435 (40%), Positives = 259/435 (59%), Gaps = 8/435 (1%)

Query: 112 ERGVLVATLQRLAEQDPLTGIANRQGFQALLNARLAENEGRGVALGHLDLDNFRHVNDAL 171
           E+    A ++ L+  D LT + NRQ F  +L   L   EG   AL  LDLD    VNDA 
Sbjct: 562 EKKAAQAQIETLSNVDQLTTLPNRQWFSRILGEWL--QEGCQGALVLLDLDQLSRVNDAF 619

Query: 172 GHQSGDRLILQVVARLKHQLEAGDQLARLGSDEFALLIDTRRDANRAEWIAERIVEALAE 231
           GH +GD L+ +V  RL+  L   D L RLG D+F +LID R D+     +   +++ LA 
Sbjct: 620 GHAAGDELLRRVGERLRKGLRPHDILGRLGGDQFGILIDGRDDSRSVATVVRHLLDILAH 679

Query: 232 PYWIDGESLLLGCSLGIAHARAQSGADP--LMWHAHIAMRQAKGSQGCTFHVFNERINRN 289
           P  + G  ++     GI     Q G D   L+ +   AM  AK S   ++H F   +N+ 
Sbjct: 680 PIQMQGSDVVTTACAGIT-LFPQDGNDVALLLRNVDTAMHHAKNSNLNSYHFFAPEMNQR 738

Query: 290 ARSLADLESELRRALRRDELELHYQPRLNLADGRIVGLEALVRWRHAERGLLPPSEFVPL 349
                 LESELR AL+ D+LELHYQP++ +  G+I G EAL+RW H E G++ P++F+PL
Sbjct: 739 VVERLRLESELRLALQLDQLELHYQPQVEIGSGQINGFEALLRWNHPELGMVSPADFIPL 798

Query: 350 AEQSGLIVPLGYWVISRALRDMQALCERGLEPLHMAVNLSFRQFQDSQLLATLSRLILEH 409
           AE++ LI+P+G WV+  A R  +   ++GL P+ +AVNLS  QFQ+S L+A +S  ++  
Sbjct: 799 AEETRLILPIGAWVLKEACRQNRQWQDQGLPPMVVAVNLSALQFQESDLVAMVSAALMTS 858

Query: 410 GVDARWLEFELTETAVMRRNEVVRQTMDALGRLGVRFSLDDFGTGFSSFVHLNSLPITLL 469
           G+  RWLE E+TE+ +M+  E +   ++ L  LGVR S+DDFGTG+SS  +L   PI  +
Sbjct: 859 GLAPRWLELEITESVIMQEPERMVGILEELKCLGVRLSIDDFGTGYSSLSYLKRFPIDKI 918

Query: 470 KVDRSFVAEMEMREENRKLVHAMINLAHNLNLEVVAEGVESEEQLTLLRGFGCDQVQGFL 529
           K+DRSF+ ++   + +  +V  +I +A  L  +V+AEGVE+ EQL  LR   C + QGFL
Sbjct: 919 KIDRSFIRDVVSSQGDAAIVRMVIAMAGELERKVIAEGVETNEQLDFLRLHQCHEFQGFL 978

Query: 530 VSRPLP---IGELMA 541
            SRP+P   + EL+A
Sbjct: 979 CSRPVPALQVPELLA 993