Pairwise Alignments

Query, 555 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 959 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  321 bits (822), Expect = 9e-92
 Identities = 181/437 (41%), Positives = 258/437 (59%), Gaps = 3/437 (0%)

Query: 110 VRERGVLVATLQRLAEQDPLTGIANRQGFQALLNARLA--ENEGRGVALGHLDLDNFRHV 167
           + ER    A ++ LAE D LT + NR   Q  L   +A     G  +AL  LDLD F+++
Sbjct: 512 ITERKAAEAQVRHLAEYDALTNLPNRVLLQDRLGQAIAAARRAGSCLALLFLDLDRFKNI 571

Query: 168 NDALGHQSGDRLILQVVARLKHQLEAGDQLARLGSDEFALLIDTRRDANRAEWIAERIVE 227
           ND+LGH  GD+++ QV  RL   + A D ++RLG DEF LL+       +A  +AE+++ 
Sbjct: 572 NDSLGHTVGDQVLCQVGERLLTAVRASDTVSRLGGDEFVLLLPQLESPAQAASVAEKLLL 631

Query: 228 ALAEPYWIDGESLLLGCSLGIA-HARAQSGADPLMWHAHIAMRQAKGSQGCTFHVFNERI 286
            LA P  ID   L +  S+GIA         D L+ +A  AM  AK S    +  F   +
Sbjct: 632 TLATPLAIDDYELAVTPSIGIAVFPEDGEDGDTLLKNADAAMYVAKESGRNNYQYFTAAM 691

Query: 287 NRNARSLADLESELRRALRRDELELHYQPRLNLADGRIVGLEALVRWRHAERGLLPPSEF 346
           N        LE+ LR+AL R EL LHYQP+ +L  G +VG EAL+RWR  E+GL+PP  F
Sbjct: 692 NARVSQRLLLENNLRQALARQELALHYQPQYDLHSGTLVGCEALLRWRQPEQGLIPPDRF 751

Query: 347 VPLAEQSGLIVPLGYWVISRALRDMQALCERGLEPLHMAVNLSFRQFQDSQLLATLSRLI 406
           +P+AE++GLI+P+G WV+  A R  QA  + GL PL +AVN+S  QF+ + L A +   +
Sbjct: 752 IPVAEETGLILPIGQWVLREACRQAQAWQDAGLPPLVVAVNISAVQFRQANLAALVQEAL 811

Query: 407 LEHGVDARWLEFELTETAVMRRNEVVRQTMDALGRLGVRFSLDDFGTGFSSFVHLNSLPI 466
              G+   WLE ELTE+ +M   E   QT+  L  +G+R +LDDFGTG+SS  +L    +
Sbjct: 812 AASGLSPCWLELELTESMLMEDGERHTQTLAQLKAMGIRLALDDFGTGYSSLAYLKRFSL 871

Query: 467 TLLKVDRSFVAEMEMREENRKLVHAMINLAHNLNLEVVAEGVESEEQLTLLRGFGCDQVQ 526
             LK+DRSF+ ++    E+  +  A+I +A +L LE +AEGVE+E+Q + L   GC Q+Q
Sbjct: 872 DKLKIDRSFIRDLPQDAEDAAITTAIIGMARDLGLETLAEGVETEQQWSFLAERGCAQMQ 931

Query: 527 GFLVSRPLPIGELMAYL 543
           GFL +RP+P  E+ A L
Sbjct: 932 GFLRARPMPADEITALL 948