Pairwise Alignments

Query, 555 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 1281 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  346 bits (887), Expect = 4e-99
 Identities = 188/443 (42%), Positives = 268/443 (60%), Gaps = 3/443 (0%)

Query: 110  VRERGVLVATLQRLAEQDPLTGIANRQGFQALLNARLAE--NEGRGVALGHLDLDNFRHV 167
            + ER    A +  LA  DPLTG+ NR   +A L   LA+    G  VA+  +DLD F+ +
Sbjct: 837  ITERKETEARIHHLAHHDPLTGLPNRFTLEARLEQSLADARRHGHKVAVMFMDLDRFKTI 896

Query: 168  NDALGHQSGDRLILQVVARLKHQLEAGDQLARLGSDEFALLIDTRRDANRAEWIAERIVE 227
            ND+LGH  GD L++++  RL+  +   D +ARLG DEF +++     AN A  +A +I+E
Sbjct: 897  NDSLGHAVGDSLLMEIAHRLRSAVRESDTVARLGGDEFVVVLPDVEGANDAAHVAGKIIE 956

Query: 228  ALAEPYWIDGESLLLGCSLGIAHARAQSGADP-LMWHAHIAMRQAKGSQGCTFHVFNERI 286
             +A    +    L    S+GI+         P +M +A  AM  AK      F  F   +
Sbjct: 957  DVARSLRVGAHELHTSASIGISLYPDDGETVPTVMQNADTAMYHAKAIGRNNFQFFASAM 1016

Query: 287  NRNARSLADLESELRRALRRDELELHYQPRLNLADGRIVGLEALVRWRHAERGLLPPSEF 346
            NR A    +LE +LR+A+  DELELH+QP+  LA  R+ G+EAL+RWRH E GL+PP  F
Sbjct: 1017 NRAATERLELERKLRQAMVNDELELHFQPQFALAADRVTGVEALLRWRHPEDGLIPPDRF 1076

Query: 347  VPLAEQSGLIVPLGYWVISRALRDMQALCERGLEPLHMAVNLSFRQFQDSQLLATLSRLI 406
            +P+AE++GLIV +G WV+  A R ++A  ++GL PL MAVNLS RQ ++ +  + ++ ++
Sbjct: 1077 IPIAEETGLIVGIGDWVLQAACRQLKAWLDQGLPPLRMAVNLSTRQLKEKEFPSRVAAIL 1136

Query: 407  LEHGVDARWLEFELTETAVMRRNEVVRQTMDALGRLGVRFSLDDFGTGFSSFVHLNSLPI 466
             E G+ A  LE E+TE+ VM R E    T+ AL  +GV  ++DDFGTG+SS  +L   PI
Sbjct: 1137 QETGLPAVLLELEITESGVMERPEEAITTLQALNDMGVTLAIDDFGTGYSSLSYLKLFPI 1196

Query: 467  TLLKVDRSFVAEMEMREENRKLVHAMINLAHNLNLEVVAEGVESEEQLTLLRGFGCDQVQ 526
              LK+DRSFV ++E   ++  +    I LAH+L LEVVAEGVE+  QL +L   GCD+VQ
Sbjct: 1197 DRLKIDRSFVRDIERDPDDAAIARGTIALAHSLGLEVVAEGVETSAQLDMLAADGCDEVQ 1256

Query: 527  GFLVSRPLPIGELMAYLLQAPGR 549
            G+  SRPLP+    A+L Q  GR
Sbjct: 1257 GYFFSRPLPLAAATAFLAQQAGR 1279