Pairwise Alignments

Query, 555 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 953 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  323 bits (829), Expect = 1e-92
 Identities = 184/441 (41%), Positives = 263/441 (59%), Gaps = 8/441 (1%)

Query: 110 VRERGVLVATLQRLAEQDPLTGIANRQGFQALLNARLAENEGRG------VALGHLDLDN 163
           + +R  L   LQ LA+ D LTG+ NR   +  L   +     RG      VAL  LDLD+
Sbjct: 510 ISDRKALEERLQFLAQHDHLTGLPNRNLLRLRLEQAVESAMERGAGGINPVALLLLDLDH 569

Query: 164 FRHVNDALGHQSGDRLILQVVARLKHQLEAGDQLARLGSDEFALLIDTRRDANRAEWIAE 223
           F+ +ND+LGH +GD+L+  VV RLK+ L     L R G DEF +++   +D  R    AE
Sbjct: 570 FKTINDSLGHHAGDQLLRTVVKRLKNILRESSTLCRQGGDEFLIVLPQAQDLARVSRAAE 629

Query: 224 RIVEALAEPYWIDGESLLLGCSLGIAHARAQ-SGADPLMWHAHIAMRQAKGSQGCTFHVF 282
            ++ ALA P+ +DG  L +  S+GI+ A    S  D L+  A  A+  AK S    +  F
Sbjct: 630 TVLAALATPFEVDGHPLSITGSIGISLAPDDGSDFDTLLKKADTALVHAKQSGRNAYRFF 689

Query: 283 NERINRNARSLADLESELRRALRRDELELHYQPRLNLADGRIVGLEALVRWRHAERGLLP 342
            E +N +      L+  L +AL R EL L+YQP+L+LA GR+VG+EAL+RWR  E GL+P
Sbjct: 690 TEAMNVSTLERLTLQQRLHQALERQELVLYYQPQLDLASGRVVGVEALLRWRTPE-GLVP 748

Query: 343 PSEFVPLAEQSGLIVPLGYWVISRALRDMQALCERGLEPLHMAVNLSFRQFQDSQLLATL 402
           P +F+PLAE++GLIVP+G WVI  A R  +   + GL P+ MAVNLS  QF    LL T+
Sbjct: 749 PGKFIPLAEETGLIVPMGAWVIQEACRQARTWLDAGLPPMTMAVNLSALQFHRDNLLITV 808

Query: 403 SRLILEHGVDARWLEFELTETAVMRRNEVVRQTMDALGRLGVRFSLDDFGTGFSSFVHLN 462
              +    + A  LE ELTE+ +++  E    T+ A+  +GV  S+DDFGTG+SS  +L 
Sbjct: 809 GDALSAASLPAASLELELTESILIQDAEATLATLKAMNAMGVLLSIDDFGTGYSSLAYLK 868

Query: 463 SLPITLLKVDRSFVAEMEMREENRKLVHAMINLAHNLNLEVVAEGVESEEQLTLLRGFGC 522
              +  LK+D+SFV ++    ++  +V A++ +A +L L+ +AEGVE+E Q   LR  GC
Sbjct: 869 RFTVDKLKIDQSFVRDITSDGDSAAIVRAVVQMASSLKLKTIAEGVETESQAAALRATGC 928

Query: 523 DQVQGFLVSRPLPIGELMAYL 543
           D+VQG+L +RP+P  E  AYL
Sbjct: 929 DEVQGYLYARPMPAAECEAYL 949