Pairwise Alignments

Query, 462 a.a., Probable multidrug resistance protein NorM from Pseudomonas putida KT2440

Subject, 460 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 90.5 bits (223), Expect = 1e-22
 Identities = 105/435 (24%), Positives = 185/435 (42%), Gaps = 44/435 (10%)

Query: 12  LLRLAGPLIASQLAHMLMVLTDTLMMARISPQALAGGGLGAASYSF-----VSIFCLGVI 66
           L ++  P+I   +A ++  L DT  ++ +  QALA     A SY+F     V+   +G+ 
Sbjct: 28  LRQMTVPMIFGLVAILMFNLVDTFFISLLGTQALA-----AISYTFPVTFAVNCITMGIG 82

Query: 67  AAVGTLVAIRKGANDIEGATRLAQNGLWLAWAL-ALFAALVLWNLEPVLLLFGQKPENVA 125
             + T +    G  D   A R++ +GL LA  L A  + L L  +EP+ LL G   E + 
Sbjct: 83  VGLSTCIGRLLGQGDGRQAARVSSHGLLLALLLVAAASTLGLLTIEPLFLLLGASHELIP 142

Query: 126 SAAEFLTLLPLALPGYLTFMALRGFTSALG-RSTPVMVISLFGTVLNYLFNVALIEGMFG 184
              E++ +  L +P  +  MA      A G   TP  ++ L G ++N   +  LI G   
Sbjct: 143 LIKEYMVVWYLTIPLLVLPMAGNSAIRATGDTKTPAKIMMLAG-LINGALDPLLIFGYGP 201

Query: 185 LPKLGLMGIGLVTAVVSMGMATALALYIRWHPAYTAYPLRKGLSRPSLAALRELWRLGLP 244
            P+LG+ G  + +A   +G              Y      K L+ PSL  LR+ W+  L 
Sbjct: 202 FPELGIQGAAIASAFSWLGALIG--------SLYLLIKREKLLAIPSLPHLRDDWQQILK 253

Query: 245 IGGTYMVEVGLFAFAALCMGVL----GSTELAAHQIALQIVSTAFMVPTGLSYAVTMRVG 300
           IG    +   +   +   + ++    G+  +AA+    +I S   +V   L+ A+T  + 
Sbjct: 254 IGTPAALSTAMNPISGALLMIMLSSHGTAAVAAYGATQRIESILILVLMSLTSALTPFMA 313

Query: 301 LYYGAGNLLAARSAGRVGIGFGAMIMFAFATLFLLLPEA--LVGLFIDRNDPAFAAIFQV 358
              GA N   ARS   + +     ++F      +++P +  L  LF         A+  +
Sbjct: 314 QNLGAQN--PARSFAGLFLSLRFSLLFQLMVFIMMVPLSIPLAALFSQEQ-----AVRDL 366

Query: 359 AVQLLMVAAWFELFDGMQTIAMGSIRGLKDAKTTFLIGLVCYWLVGAPSAWLFTFTLGGG 418
               L+V      F G+  + + ++  L      F    +  ++   P+AW+      GG
Sbjct: 367 LWHYLLVVPVSYGFQGVVMMLVSALNALHQPLKAFQWSFMRLFVFTLPAAWI------GG 420

Query: 419 AV----GIWWGLALG 429
            +    G++ G+A+G
Sbjct: 421 RLYNIEGLFIGIAVG 435