Pairwise Alignments

Query, 462 a.a., Probable multidrug resistance protein NorM from Pseudomonas putida KT2440

Subject, 458 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 72.0 bits (175), Expect = 4e-17
 Identities = 89/407 (21%), Positives = 157/407 (38%), Gaps = 18/407 (4%)

Query: 10  KALLRLAGPLIASQLAHMLMVLTDTLMMARISPQALAGGGLGAASYSFVSIFCLGVIAAV 69
           + L+ +A P+    +      L D LM+ ++    +A  G+ A +    +I  +GV    
Sbjct: 17  RRLIAIALPITLQNIMFSSRGLVDVLMLGQLGEAEIAAVGVAARATFVTTIMLVGVTTGG 76

Query: 70  GTLVAIRKGANDIEGATRLAQNGLWLAWALALFAA-----LVLWNLEPVLLLFGQKPENV 124
             L A   GA D +G     +    L W ++ F A     L L+  + ++ L     +  
Sbjct: 77  ALLTAQYWGAGDRKG----VRESTALTWLVSNFFAFFTVLLFLFFPQQIMSLTTDSEQVN 132

Query: 125 ASAAEFLTLLPLALPGYLTFMALRGFTSALGRSTPVMVISLFGTVLNYLFNVALIEGMFG 184
           A  +++L +    +       ++     A+ +       S  G V N + N  LI G FG
Sbjct: 133 ALGSQYLIITSFTMFAVACVSSMAVGLRAMHKPGVSTFFSGIGIVSNVVLNWILIFGKFG 192

Query: 185 LPKLGLMGIGLVTAVVSMGMATALALYIRWHPAYTAYPLRKGLSRPSLAALRELWRLGLP 244
            P +G+ G  + T +        L  Y+       A+  +   +      +    RL LP
Sbjct: 193 FPAMGIQGAAIATVLSGAIEIACLYSYLYGKKHLMAFGWQDIKAVIDWPKISRFLRLSLP 252

Query: 245 IGGTYMV-EVGLFAFAALCMGVLGSTELAAHQIALQIVSTAFMVPTGLSYAVTMRVGLYY 303
               +++   GLF + A+ MG  G   LAA  +   + S +  +  G+S A  + VG   
Sbjct: 253 TTFNFLIWAAGLFTYHAI-MGQTGVQGLAALSVMTPVESISLSLLIGMSTAAAVLVGNQL 311

Query: 304 GAGNLLAA--RSAGRVGIGFGAMIMFAFATLFLLLPEALVGLFIDRNDPAFAAIFQVAVQ 361
           GA N  A   ++ G         I+ A     + +P  ++G F     P    + +  + 
Sbjct: 312 GAKNYEAVYYQAIGVTACSVLVGIVVAIGLYLVQIP--VLGAFTALT-PETRELSEKFML 368

Query: 362 LLMVAAWFELFDGMQTIAMGSIRGLKDAKTTFLIGLVCYWLVGAPSA 408
           +L +      F    T  +G +R   D K      +V  W +G P A
Sbjct: 369 ILCLGIVLRSFP--MTAIVGVLRAGGDVKFCLGQDIVAQWCIGIPLA 413