Pairwise Alignments

Query, 462 a.a., Probable multidrug resistance protein NorM from Pseudomonas putida KT2440

Subject, 457 a.a., multidrug resistance protein NorM from Vibrio cholerae E7946 ATCC 55056

 Score =  202 bits (515), Expect = 1e-56
 Identities = 136/445 (30%), Positives = 210/445 (47%), Gaps = 10/445 (2%)

Query: 8   ELKALLRLAGPLIASQLAHMLMVLTDTLMMARISPQALAGGGLGAASYSFVSIFCLGVIA 67
           E   L++LA P++ + +A   M   DT+M   +S   +A   + A+ +    +F +G++ 
Sbjct: 7   EASNLIKLATPVLIASVAQTGMGFVDTIMAGGVSAIDMAAVSIAASIWLPSILFGVGLLM 66

Query: 68  AVGTLVAIRKGANDIEGATRLAQNGLWLAWALALFAALVLWNLEPVLLLFGQKPENVASA 127
           A+  +VA   GA            GL LA  +++    VL+  + ++     +       
Sbjct: 67  ALVPVVAQLNGAGRQHKIPFEVHQGLILALLVSVPIIAVLFQTQFIIRFMDVEEAMATKT 126

Query: 128 AEFLTLLPLALPGYLTFMALRGFTSALGRSTPVMVISLFGTVLNYLFNVALIEGMFGLPK 187
             ++  +  A+P YL F ALR FT  +  + P MVI   G +LN   N   + G FG P+
Sbjct: 127 VGYMHAVIFAVPAYLLFQALRSFTDGMSLTKPAMVIGFIGLLLNIPLNWIFVYGKFGAPE 186

Query: 188 LGLMGIGLVTAVVSMGMATALALYIRWHPAYTAYPLRKGLSRPSLAALRELWRLGLPIGG 247
           LG +G G+ TA+V   M   L  YI          + +   +P    L  L+RLG P+  
Sbjct: 187 LGGVGCGVATAIVYWIMLLLLLFYIVTSKRLAHVKVFETFHKPQPKELIRLFRLGFPVAA 246

Query: 248 TYMVEVGLFAFAALCMGVLGSTELAAHQIALQIVSTAFMVPTGLSYAVTMRVGLYYGAGN 307
               EV LFA  AL +  LGST +AAHQ+AL   S  FM P  +  AV++RVG   G  +
Sbjct: 247 ALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMFPMSIGAAVSIRVGHKLGEQD 306

Query: 308 LLAARSAGRVGIGFGAMIMFAFATLFLLLPEALVGLFIDRNDPAFAAIFQVAVQLLMVAA 367
              A  A  VG+  G       A L +L  E +  L+ +        +  +A+QLL+ AA
Sbjct: 307 TKGAAIAANVGLMTGLATACITALLTVLFREQIALLYTENQ-----VVVALAMQLLLFAA 361

Query: 368 WFELFDGMQTIAMGSIRGLKDAKTTFLIGLVCYWLVGAPSAWLFTFT-----LGGGAVGI 422
            ++  D +Q +A GS+RG KD    F    + YW++G P+ ++   T        GA G 
Sbjct: 362 IYQCMDAVQVVAAGSLRGYKDMTAIFHRTFISYWVLGLPTGYILGMTNWLTEQPLGAKGF 421

Query: 423 WWGLALGLACAAVALTFGFEWRMKR 447
           W G  +GL+ AA+ L     W  K+
Sbjct: 422 WLGFIIGLSAAALMLGQRLYWLQKQ 446



 Score = 41.2 bits (95), Expect = 7e-08
 Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 3/132 (2%)

Query: 2   HVAPTTELKALLRLAGPLIASQLAHMLMVLTDTLMMARISPQALAGGGLGAASYSFVSIF 61
           H     EL  L RL  P+ A+    + +     L++A +    +A   +     S V +F
Sbjct: 227 HKPQPKELIRLFRLGFPVAAALFFEVTLFAVVALLVAPLGSTVVAAHQVALNFSSLVFMF 286

Query: 62  CLGVIAAVGTLVAIRKGANDIEGATRLAQNGLWLAWALALFAAL--VLWNLEPVLLLFGQ 119
            + + AAV   V  + G  D +GA   A  GL    A A   AL  VL+  E + LL+ +
Sbjct: 287 PMSIGAAVSIRVGHKLGEQDTKGAAIAANVGLMTGLATACITALLTVLFR-EQIALLYTE 345

Query: 120 KPENVASAAEFL 131
               VA A + L
Sbjct: 346 NQVVVALAMQLL 357