Pairwise Alignments

Query, 462 a.a., Probable multidrug resistance protein NorM from Pseudomonas putida KT2440

Subject, 462 a.a., MATE efflux family protein from Synechococcus elongatus PCC 7942

 Score =  281 bits (719), Expect = 3e-80
 Identities = 162/427 (37%), Positives = 243/427 (56%), Gaps = 2/427 (0%)

Query: 8   ELKALLRLAGPLIASQLAHMLMVLTDTLMMARISPQALAGGGLGAASYSFVSIFCLGVIA 67
           EL+  L+LA PL A+Q+A   +   DT+MM R+ P+ LA GGL +A + F+     GV+ 
Sbjct: 7   ELQQFLQLAIPLAAAQVAQAAVGFVDTVMMGRLGPEPLAAGGLASALFQFILATASGVVM 66

Query: 68  AVGTLVAIRKGANDIEGATRLAQNGLWLAWALALFAALVLWNLEPVLLLFGQKPENVASA 127
           AV  LVA  +GA        +A+ GLWL+  L L   L++  L  ++ + GQ    +A A
Sbjct: 67  AVSPLVAEAQGAGKDYKIAAIARQGLWLSVLLGLPVMLIISQLARLMPVLGQSATTIALA 126

Query: 128 AEF-LTLLPLALPGYLTFMALRGFTSALGRSTPVMVISLFGTVLNYLFNVALIEGMFGLP 186
            ++ + +L   +PG L F  LRG+ +AL ++  ++ + LFGT++N L N  L  G  G P
Sbjct: 127 RDYWMAVLWGIIPG-LGFAMLRGYVAALEQARIILPLVLFGTLVNGLGNYLLGYGQLGFP 185

Query: 187 KLGLMGIGLVTAVVSMGMATALALYIRWHPAYTAYPLRKGLSRPSLAALRELWRLGLPIG 246
           +L L G+GL +A+    M   L  Y  W P    YP  +   R   +  R++ +LG  I 
Sbjct: 186 RLELTGLGLSSALGLWVMFLGLLAYTAWQPKLRRYPFWQDWRRLQPSICRQILQLGWAIA 245

Query: 247 GTYMVEVGLFAFAALCMGVLGSTELAAHQIALQIVSTAFMVPTGLSYAVTMRVGLYYGAG 306
            T  VE GLF    + MG +G   LAAHQ   Q +   FMVP G S+AVT+RVG + G  
Sbjct: 246 VTVAVEFGLFTIITILMGAIGVEALAAHQTVSQTIILIFMVPLGCSFAVTVRVGWWLGRQ 305

Query: 307 NLLAARSAGRVGIGFGAMIMFAFATLFLLLPEALVGLFIDRNDPAFAAIFQVAVQLLMVA 366
           + L AR AG VG+G  A+ M   A    L P A+VG+++D N+P  A +  +A+ +L VA
Sbjct: 306 DGLGARRAGLVGVGAIALWMLLLAIPLALFPRAIVGIYVDLNNPVNAGLLNLALPMLRVA 365

Query: 367 AWFELFDGMQTIAMGSIRGLKDAKTTFLIGLVCYWLVGAPSAWLFTFTLGGGAVGIWWGL 426
           +   + DG+Q +AMG++ GL+D +   L+ L+ +W+VG  S+ +  F LG G+ G+W G 
Sbjct: 366 SLALVLDGVQRVAMGALHGLQDTRIPLLLSLLAFWMVGVGSSAMLGFQLGWGSTGLWIGQ 425

Query: 427 ALGLACA 433
           +LG+A A
Sbjct: 426 SLGVAIA 432



 Score = 33.1 bits (74), Expect = 2e-05
 Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 4/109 (3%)

Query: 233 AALRELWRLGLPIGGTYMVEVGLFAFAALCMGVLGSTELAAHQIALQIVSTAFMVPTGLS 292
           A L++  +L +P+    + +  +     + MG LG   LAA  +A  +        +G+ 
Sbjct: 6   AELQQFLQLAIPLAAAQVAQAAVGFVDTVMMGRLGPEPLAAGGLASALFQFILATASGVV 65

Query: 293 YAVTMRVGLYYGAGNLLAARSAGRVGIG----FGAMIMFAFATLFLLLP 337
            AV+  V    GAG      +  R G+      G  +M   + L  L+P
Sbjct: 66  MAVSPLVAEAQGAGKDYKIAAIARQGLWLSVLLGLPVMLIISQLARLMP 114