Pairwise Alignments

Query, 462 a.a., Probable multidrug resistance protein NorM from Pseudomonas putida KT2440

Subject, 475 a.a., Multi antimicrobial extrusion protein MatE (NCBI) from Rhodospirillum rubrum S1H

 Score =  184 bits (466), Expect = 7e-51
 Identities = 141/464 (30%), Positives = 206/464 (44%), Gaps = 13/464 (2%)

Query: 5   PTTELKALLRLAGPLIASQLAHMLMVLTDTLMMARISPQALAGGGLGAASYSFVSIFCLG 64
           P + L  LL L+ P+I SQ A M   + D +M   +    L     GAA +  + IF LG
Sbjct: 14  PASVLPPLLLLSAPIIISQCAQMASGVVDVIMAGNLDVLTLGTVATGAALWVPMMIFLLG 73

Query: 65  VIAAVGTLVAIRKGANDIEGATRLAQNGLWLAW-ALALFAALVLWNLEPVLLLFGQKPEN 123
           ++  V   +    G N  E  + +A  GL +     AL  AL+ W   P+  LFG  PE 
Sbjct: 74  LLYGVTPTIGKMLGENASEAVSGVAARGLLVGLLGGALLGALLFWMSTPLFRLFGVAPEL 133

Query: 124 VASAAEFLTLLPLALPGYLTFMALRGFTSALGRSTPVMVISLFGTVLNYLFNVALIEGMF 183
           +  A+ +L  + LA+PG   F+A R    A      V V+++ G       N AL+ G  
Sbjct: 134 IPEASAYLNWMALAMPGMGLFLAFRFVIEAHHVGWIVTVVAVLGVAAKIWLNDALVHGHA 193

Query: 184 GLPKLGLMGIGLVTAVVSMGMATALALYIRWHPAY-TAYPLRKGLSRPSLAALRELWRLG 242
           GLP LG  G G  +  +  GMA  LA     H A    +  R   +  SLAA+    R G
Sbjct: 194 GLPALGTGGFGAASVALYWGMAVMLAGATFLHGAVKPLWTHRLSGADLSLAAIGRFLRFG 253

Query: 243 LPIGGTYMVEVGLFAFAALCMGVLGSTELAAHQIALQIVSTAFMVPTGLSYAVTMRVGLY 302
           LPI   ++ +  + A  A+ +  LG+  + AHQI   I+    M+PTGLS A T+ +   
Sbjct: 254 LPIALNFLSDYLIMAVVAVFIATLGAVAIGAHQITFNILMVLLMMPTGLSMAATILISRS 313

Query: 303 YGAGNLLAARSAGRVGIGFGAMIMFAFATLFLLLPEALVGLFIDRNDPAFAAIFQVAVQL 362
            G G+           +G G       A L       ++ L+ D      A +  +A+ L
Sbjct: 314 PGGGHTATLGPVMSWTLGIGVAFSIVLAVLLAAFDAPVIRLYTDD-----AEVIALALDL 368

Query: 363 LMVAAWFELFDGMQTIAMG-SIRGLKDAKTTFLIGLVCYWLVGAPSAWLFTFT----LGG 417
           L V  +    D +  IA+G  +RGL D  + FLI L  +WL+  P  ++  FT       
Sbjct: 369 LGVVVFILTID-VVAIALGFFLRGLGDPGSPFLILLAAHWLISLPVGYVLCFTDWVVAPQ 427

Query: 418 GAVGIWWGLALGLACAAVALTFGFEWRMKRLLGKAGVRTEAAVS 461
           G +G W+GL+ GL  A   L      R+ R         EA V+
Sbjct: 428 GPLGWWYGLSTGLLVACCLLGLRLRQRLSRAAQPVCSPAEATVA 471