Pairwise Alignments

Query, 462 a.a., Probable multidrug resistance protein NorM from Pseudomonas putida KT2440

Subject, 452 a.a., putative transport protein, multidrug efflux protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  156 bits (395), Expect = 1e-42
 Identities = 121/450 (26%), Positives = 193/450 (42%), Gaps = 31/450 (6%)

Query: 10  KALLRLAGPLIASQLAHMLMVLTDTLMMARISPQALAGGGLGAASYSFVSIFCLGVIAAV 69
           KAL+ L  P++  Q+  +++   DTLM+   S   L         ++ V IF  G    +
Sbjct: 13  KALISLGLPIVIGQIGVIVLGFADTLMIGHHSTIELGAASFVNNVFNLVIIFSTGFSYGL 72

Query: 70  GTLVAIRKGANDIEGATRLAQNGLWLAWALALFAALVLWNLEPVLLLFGQKPENVASAAE 129
             +V    G +    A +  +N L     LA      L  +   +L F     NV +  +
Sbjct: 73  TPIVGGLYGTHQYASAGQALRNSL-----LANLLVAFLLTIGMTVLYF-----NVGNLGQ 122

Query: 130 FLTLLPLALPGYLTFMA----------LRGFTSALGRSTPVMVISLFGTVLNYLFNVALI 179
              L+PL  P YL  +A           + FT  +  +   M I L G VLN + N  LI
Sbjct: 123 PEELIPLIKPYYLVLLASLVFVMLFNGFKQFTDGITDTKTAMWILLGGNVLNIIGNYILI 182

Query: 180 EGMFGLPKLGLMGIGLVTAVVSMGMATALALYIRWHPAYTAYPL---RKGLSRPSLAALR 236
            G  GLP++GL+G G+ T    + M     +     P +  + L   R G S+     L 
Sbjct: 183 YGKLGLPEMGLLGAGISTLFSRIMMVVVFIIVFMRSPRFLRFKLGFYRLGWSKAIFGRLN 242

Query: 237 ELWRLGLPIGGTYMVEVGLFAFAALCMGVLGSTELAAHQIALQIVSTAFMVPTGLSYAVT 296
            L   G PI     +E   F+ +A+ +G LG+  LA+HQ+ L I    FM+  G+  AV 
Sbjct: 243 SL---GWPIAFQMGMETASFSLSAVMIGWLGTIALASHQVMLAISQFTFMMYYGMGAAVA 299

Query: 297 MRVGLYYGAGNLLAARSAGRVGIGFGAMIMFAFATLFLLLPEALVGLFIDRNDPAFAAIF 356
           +RV  + G G++L  R +   G      +    +++  L    L G F D  + A     
Sbjct: 300 VRVSNFNGQGDILNVRRSAYAGFHLMMALGVVLSSIVFLCRNYLGGWFTDSTEVA----- 354

Query: 357 QVAVQLLMVAAWFELFDGMQTIAMGSIRGLKDAKTTFLIGLVCYWLVGAPSAWLFTFTLG 416
            +   L++    ++  DG+Q     ++RG+ D K   LI  + Y+L+  P  +   F L 
Sbjct: 355 AMVTSLILPFLVYQFGDGLQITFANALRGISDVKLMMLIAFIAYFLISLPVGYFCGFVLE 414

Query: 417 GGAVGIWWGLALGLACAAVALTFGFEWRMK 446
            G +G+W     GL  A + L + F  + K
Sbjct: 415 WGIIGVWMAFPFGLTSAGLMLWWRFHHKTK 444