Pairwise Alignments

Query, 462 a.a., Probable multidrug resistance protein NorM from Pseudomonas putida KT2440

Subject, 443 a.a., BexA: efflux pump for ciprofloxacin, lomefloxacin, and paraquat (from data) from Bacteroides thetaiotaomicron VPI-5482

 Score = 62.4 bits (150), Expect = 3e-14
 Identities = 68/349 (19%), Positives = 132/349 (37%), Gaps = 6/349 (1%)

Query: 10  KALLRLAGPLIASQLAHMLMVLTDTLMMARISPQALAGGGLGAASYSFVSIFCLGVIAAV 69
           K +  +A P++ S +   L+ +TDT  + R+    L    +    Y  + +   G     
Sbjct: 8   KQIWTIAYPILISLIMEQLIGMTDTAFLGRVGEIELGASAIAGVYYLAIFMMAFGFSVGA 67

Query: 70  GTLVAIRKGANDIEGATRLAQNGLWLAWALALFAALVLWNLEPVLLLFGQKPENVASAAE 129
             L+A R G  + +    +   G++    +A     +     P +L       ++  AAE
Sbjct: 68  QILIARRNGEGNYKEIGPIFYQGIYFLVVVAAILFTLSIVFSPFILKNIISSPHIYDAAE 127

Query: 130 FLTLLPLALPG-YLTFMAL--RGFTSALGRSTPVMVISLFGTVLNYLFNVALIEGMFGLP 186
             + +   + G + +F+ +  R F     ++  + + S+   + N +FN  LI G FG P
Sbjct: 128 --SYIHWRVYGFFFSFVGVMFRAFFVGTTQTKTLTLNSIVMVLSNVVFNYILIFGKFGFP 185

Query: 187 KLGLMGIGLVTAVVSMGMATALALYIRWHPAYTAYPLRKGLSRPSLAALRELWRLGLPIG 246
           +LG+ G  + +++  +       +Y         Y L   L +     L+ +  + +   
Sbjct: 186 QLGIAGAAIGSSLAELVSVIFFIIYTWKRIDCKKYALNI-LPKFQSRTLKRILNVSVWTM 244

Query: 247 GTYMVEVGLFAFAALCMGVLGSTELAAHQIALQIVSTAFMVPTGLSYAVTMRVGLYYGAG 306
               V +  +    L +  LG   LA   I   +    FM+    +      V    GAG
Sbjct: 245 IQNFVSLSTWFMFFLFVEHLGERSLAIANIIRNVSGIPFMIAMAFAATCGSLVSNLIGAG 304

Query: 307 NLLAARSAGRVGIGFGAMIMFAFATLFLLLPEALVGLFIDRNDPAFAAI 355
                R      I  G + +      F L P+ ++ ++ D  D   A+I
Sbjct: 305 EKDCVRGTINQHIRIGYVFVLPILIFFCLFPDLILRIYTDMPDLRDASI 353