Pairwise Alignments

Query, 308 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 291 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  134 bits (337), Expect = 3e-36
 Identities = 100/282 (35%), Positives = 152/282 (53%), Gaps = 16/282 (5%)

Query: 3   RQLPPLYALRAFEAAARLSSFTRAGEELSITQSAISRHIRTLEEHFACRLFVRSGRSLQL 62
           R++PPL AL+ FEAAARL  F+RA +EL ITQSA+S  +R LEEHFA  LF R GRSL+L
Sbjct: 2   RKIPPLRALQVFEAAARLQHFSRAAQELCITQSAVSHQVRLLEEHFALPLFRREGRSLRL 61

Query: 63  TEAGRVLLPGVREGFAAFERACETLCGE-DDILRMKAPSTLTMRWLLACLSRFRHLQPGN 121
           T+ G  L       F         L GE  + LR+   S+  ++WL+  LS FR L PG 
Sbjct: 62  TDKGEQLFQETARIFNELGELNLRLLGEKPEALRLAVYSSFAVKWLIPRLSGFRRLHPGI 121

Query: 122 EVQLTSAWMDVDHVDFNQEPFDCAVLLSDGVFPPEWEVRKLFPELLIPVGAPDLL-DEEP 180
           +V+L     D      + + F        G     W+ + L  E LIPV +P+L+   + 
Sbjct: 122 QVRLDMITEDPVLSHSSADMFITGQQDQKGY----WQ-QLLHAERLIPVCSPELISSSDK 176

Query: 181 WDVCRLASVELLHPTVDK----RDWREWLERMGLGDQVSLKGGQVFDTLELGMIAAARGY 236
            D+  L++ +LL  TVD+     DW+ W E   +  Q   +  Q+F  + + + AA  G 
Sbjct: 177 LDLDWLSTQQLL--TVDEGPLGLDWQRWFEHHRVA-QPEEEQQQLFSHVLMAIEAAIAGQ 233

Query: 237 GISMGDLLMVAEDVAQKRL-SLPWPTAVPSGMDYYLVWPRTR 277
           G+++    MV +D+A++RL +LP+   + +G ++  +  + R
Sbjct: 234 GVALASDFMVLDDIAKQRLVALPF-AGIDTGFEFNFLCKQRR 274