Pairwise Alignments

Query, 296 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 308 a.a., Transcriptional Regulator, LysR family (NCBI) from Rhodospirillum rubrum S1H

 Score =  150 bits (378), Expect = 5e-41
 Identities = 108/297 (36%), Positives = 144/297 (48%), Gaps = 9/297 (3%)

Query: 1   MSKRLVPSMTALQCFEAAARHLSFTRAAEELHLTQSAVSKQVAQLEDMLRHHLFLRIRRR 60
           MS+RL P + AL+ FEAAARH  FTRAAEEL +T +AVS QV  LED+L   LF R+ R 
Sbjct: 1   MSRRL-PPLNALRAFEAAARHGGFTRAAEELGVTPAAVSHQVKGLEDVLGLCLFRRLPRG 59

Query: 61  LQLTPAGSLYLAEVNKILTQVDMSSRYVLTYGEQTEILKVATQPSFGVRWLIPHLKGFGK 120
           L+LT  G  YL ++++   ++  +    L  G     L V+  PSF   WL P L  F  
Sbjct: 60  LELTEEGQAYLPDLSRGFDRLARAGER-LREGGLAGRLTVSVLPSFCANWLAPRLPDFQA 118

Query: 121 RHGNIHLDIRNEMEPFALLQGSADVVFFYGQGTWPGATCVELFREEVVPVCAPELLAGR- 179
               +HL + +E       +   D+   YG+G +PG   +    EEV PVCAP LL G  
Sbjct: 119 ACPEVHLRMLSENRFADFNRDGIDMAIRYGRGIYPGLRAIPFLAEEVFPVCAPSLLNGAL 178

Query: 180 KLAGAEELAELVLLQSTSRPEA-----WHEWFLEQDLQSVSAYHGPRFDTFYMALSAAQA 234
            L G  +L    LL+S           W  W   + ++ V+   G  F      + A  A
Sbjct: 179 PLRGLADLRHHTLLRSIDETAGEPWLYWRLWLAAEGIEGVAPDGGIGFTDGSALVQACLA 238

Query: 235 GCGVALVPRYLAAKELADGSLVVPWNHAMRSAGAHYLAYAEHA-AEVPKVRALVEWI 290
           G GVAL    L    L  G LV P+    R A   Y A A  A  E P+V   ++W+
Sbjct: 239 GVGVALGRTALVEDHLRTGRLVRPFAGLSRPADFSYFAVAPAANLENPRVACFIDWL 295