Pairwise Alignments

Query, 296 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 297 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  157 bits (398), Expect = 2e-43
 Identities = 93/290 (32%), Positives = 152/290 (52%), Gaps = 13/290 (4%)

Query: 6   VPSMTALQCFEAAARHLSFTRAAEELHLTQSAVSKQVAQLEDMLRHHLFLRIRRRLQLTP 65
           +P + AL+ FE+AAR  S T A++ELH+T  A+SKQ+  LED L   LF+R+ ++++LT 
Sbjct: 5   LPPLNALRAFESAARLQSITLASKELHVTHGAISKQIRVLEDFLGFALFVRLHKKVELTD 64

Query: 66  AGSLYLAEVNKILTQVDMSSRYVLTYGEQTEILKVATQPSFGVRWLIPHLKGFGKRHGNI 125
               Y   V   L  +  ++  + + G + + L +   PS  + WLIP ++ F  R+ ++
Sbjct: 65  EAKRYFPHVQAALQTLSSATADLRSQGSRPQTLAINVLPSLTINWLIPRMEQFKSRYPHL 124

Query: 126 HLDIRNEMEPFALLQGSADVVFFYGQGTWPGATCVELFREEVVPVCAPELLAGRKLAGAE 185
           ++D+          QG  D+          G   ++L  E++  VCAP L    KL   E
Sbjct: 125 YVDLSIGDFAVDFSQGRYDIAIRSSTKLPKGVNYIKLMDEDLCLVCAPSL--APKLQCIE 182

Query: 186 ELAELVLLQSTSRPEAWHEWFLEQDL-----QSVSAYHGPRFDTFYMALSAAQAGCGVAL 240
           ++  + LL+ T+RPE W  W  +  L     Q+    H      FYM   AA +G G AL
Sbjct: 183 DINHVTLLKHTTRPELWDYWAEKVGLVLTQEQTFGVEH------FYMLSQAAASGMGAAL 236

Query: 241 VPRYLAAKELADGSLVVPWNHAMRSAGAHYLAYAEHAAEVPKVRALVEWI 290
           +PR+   ++LA+GSLV+P++    S   +YL   +  +   KV+A +EW+
Sbjct: 237 IPRFFIEEQLANGSLVIPFHSTFTSPYVYYLLTPKSPSLPLKVQAFIEWM 286