Pairwise Alignments

Query, 303 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 291 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  146 bits (369), Expect = 5e-40
 Identities = 88/287 (30%), Positives = 147/287 (51%), Gaps = 9/287 (3%)

Query: 10  FTQVVEHGGFAPAGRALDMPKSKLSRRIADLEDRLGVRLLNRTSRHCSLTEIGQAYYNRC 69
           F  V E   F  A + L++  + +SR+I  LE+RLG +L  RT+R  SLTE G  YY  C
Sbjct: 10  FVAVAEAENFTLAAQRLNVSTAHVSRQIGALENRLGTKLFYRTTRKVSLTEEGTIYYRHC 69

Query: 70  LAMRVEAEGAAEIIERNRSEPRGLVRISCPTTLLNSWVGPMLTRYMLKYPQVELFIESTN 129
             ++   E A   I   +  P+GLV+++ P      ++ P+L  +M++YP VE  ++ TN
Sbjct: 70  RQLQTGLEEAERAITDLKDSPQGLVKLTAPVAYGEKFIMPLLNDFMVQYPSVECNVDLTN 129

Query: 130 RRVDLLHEGFDIALRVRFPPLENTDMVMKVLSNSTQCLVGQPQYLAQLPKGFDPQLLGTL 189
           R +DL+  G+D+A  +R   L ++ ++ K LS+ T  +   P Y   + K  +P  L  L
Sbjct: 130 RTLDLIEGGYDLA--IRLGKLADSSLMAKPLSSRTHYVAASPSY---VEKYGEPHTLSEL 184

Query: 190 PSVHWGSAQREYQWELFQGEDNSRSIVIPHTPRMVTDDLFALRHFVVAGVGIAHLPRVAV 249
              +       Y   +  G + +  +      +++ +  +ALR   + G+GI  LP   +
Sbjct: 185 NQHNCLIGNHNYWRFIEHGRERNFKV----RGKLICNSGYALRDAALKGIGIVQLPDYYI 240

Query: 250 REDLAAGRLVELIPDWHPRCGIVHAIFPSRRGLLPSVRALIDHLAEE 296
            ED+ AGRL+  +         + A++P  R L   VR L+D+LAE+
Sbjct: 241 EEDIHAGRLISFLDTHREAKEGIWALYPQNRHLSAKVRVLVDYLAEK 287