Pairwise Alignments

Query, 134 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 298 a.a., HTH-type transcriptional activator RhaR from Enterobacter sp. TBS_079

 Score = 69.7 bits (169), Expect = 3e-17
 Identities = 42/128 (32%), Positives = 70/128 (54%), Gaps = 4/128 (3%)

Query: 6   LSALNRRVAMYPGTPEAPLQTPGALTPARLRRAKELMLHSPLSIIEIAAVC---NLTRSH 62
           LS + + +  +  T  A  Q+ G L+   L+ A E + +SP+  + I ++     ++ +H
Sbjct: 166 LSLILQLIKNHSNTLTAAGQSQGVLSSRALKMALEKLDNSPIGDVTIKSLALELGVSSAH 225

Query: 63  FSRAFKVNTGLSPQAWRLLARMEKA-KRLLATEAPITHVSLECGFCDQAHFTRAFSRLVG 121
           F RAFK +TGL+P  W     ME+A   L  T+  IT +++E G+  Q  FT+AF ++ G
Sbjct: 226 FCRAFKNSTGLTPYGWLKQRVMERAFHELQHTDKLITEIAIESGYGSQNAFTQAFRKITG 285

Query: 122 QPPKAWRQ 129
             P  WR+
Sbjct: 286 LTPGQWRE 293



 Score = 26.9 bits (58), Expect = 2e-04
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 84  MEKAKRLLATEAPITHVSLECGFCDQAHFTRAFSRLVGQPPKAWRQAQTL 133
           +EK       +  I  ++LE G    AHF RAF    G  P  W + + +
Sbjct: 199 LEKLDNSPIGDVTIKSLALELGV-SSAHFCRAFKNSTGLTPYGWLKQRVM 247