Pairwise Alignments

Query, 299 a.a., Tyrosine recombinase XerC from Pseudomonas putida KT2440

Subject, 330 a.a., site-specific tyrosine recombinase XerC from Sinorhizobium meliloti 1021

 Score =  169 bits (428), Expect = 8e-47
 Identities = 104/295 (35%), Positives = 159/295 (53%), Gaps = 13/295 (4%)

Query: 8   YCAHLRNERQVSEHTSQGYRRDLEKVIAYCEEH-----GIADWQALQIQQLRQLIARLHH 62
           + A L  ER++SE T   Y RD  + + +   H      ++D  AL+   LR  +A+   
Sbjct: 38  WLASLAEERRLSEKTVDAYERDTRQFLTFLTGHLAGPPRLSDICALRPADLRGFLAQRRK 97

Query: 63  HGQSPRSLARLLSAVRGLYRYLNREGLCQHDPANGLSAPKGERRLPKVLDTDRALQLLDG 122
            G   R+L R L+ +R   RYL R GL     A  + +PK  + LPK L    AL+++  
Sbjct: 98  GGAGARTLGRGLAGLRSFLRYLERNGLANAAGAGAVRSPKQPKSLPKALTDREALKVVTA 157

Query: 123 GV---DDDFIARRDQAILELFYSSGLRLSELTNLDLDHLDLAAGL--VQVLGKGGKARVL 177
                ++ +IA R+ A+L L Y  GLR++E   LDL   D +  +  ++V GKGGK R++
Sbjct: 158 DAQLAEEPWIAARNAAVLTLLYGCGLRIAEA--LDLTPADFSGPVTSLRVTGKGGKTRIV 215

Query: 178 PVGRKAREALQAWYRLRGIGNPRDRAVFITRQGNRISPRAVRLRV-KVAGERELGQHLHP 236
           P+   A EA++ + +L       +  +F   +G ++ P  ++  + K+     L     P
Sbjct: 216 PMIAAAAEAVETYRKLCPYHIEPEEPIFRGARGAKLQPAIIQREMQKLRAALGLPDSATP 275

Query: 237 HMLRHSFASHVLESSQDLRAVQEMLGHADISTTQIYTHLDFQHLAAVYDSAHPRA 291
           H LRHSFA+H+L    DLR +QE+LGHA +STTQ+YT +D   L  +YD AHPRA
Sbjct: 276 HALRHSFATHLLAGGGDLRTIQELLGHASLSTTQVYTGVDSARLLEIYDRAHPRA 330