Pairwise Alignments

Query, 299 a.a., Tyrosine recombinase XerC from Pseudomonas putida KT2440

Subject, 329 a.a., Integrase/recombinase from Sinorhizobium meliloti 1021

 Score =  109 bits (273), Expect = 7e-29
 Identities = 82/296 (27%), Positives = 135/296 (45%), Gaps = 19/296 (6%)

Query: 11  HLRNERQVSEHTSQGYRRDLEKVIAYCEEHGIADWQALQIQQLR--QLIARLHH----HG 64
           HL  ER+ S HT   Y    + ++ +           LQI+ +    ++A L H     G
Sbjct: 15  HLPRERRASVHTCDAYAYSFQLLVTFAARRLSKRPCLLQIEDIDVPMILAFLEHIEETRG 74

Query: 65  QSPRSLARLLSAVRGLYRYLNREGLCQHDPA---NGLSAPKGERRLPKVLDTDRALQLLD 121
              RS    L+AV+  +RYL        D A   + +   K +  L   L       LL+
Sbjct: 75  NKARSRNARLAAVKSFFRYLEHRVPAVLDQALRVHAMPMKKIDEALVASLSRTEVQALLN 134

Query: 122 GGVDDDFIARRDQAILELFYSSGLRLSELTNLDLDHLD-LAAGLVQVLGKGGKARVLPVG 180
                     RD+A+L L ++ GLR+SEL  L LD  D  +   + ++GKG + RVLP+ 
Sbjct: 135 APDRRSLSGIRDRAMLHLAFAGGLRVSELVGLTLDQFDGRSPASIHIIGKGRRERVLPLW 194

Query: 181 RKAREALQAWYRLRGIGNPRDRAVFITRQGNRISPRAVRLRVKVAGERELG-------QH 233
           ++   A++AW  +R      D A+F+   G  ++       ++      +        + 
Sbjct: 195 QETAAAIRAWIAVRPKNG--DTALFLNNAGRMMTRSGFEYILEKHAAAAVSVAPTLATKS 252

Query: 234 LHPHMLRHSFASHVLESSQDLRAVQEMLGHADISTTQIYTHLDFQHLAAVYDSAHP 289
           + PH+LRHS A H+L++++D+R V   LGHA + +T+IY   D      + D+  P
Sbjct: 253 ISPHVLRHSCAMHMLQATRDIRKVALWLGHASLQSTEIYLRADPTEKLEMLDALAP 308