Pairwise Alignments

Query, 299 a.a., Tyrosine recombinase XerC from Pseudomonas putida KT2440

Subject, 299 a.a., site-specific tyrosine recombinase XerD from Pedobacter sp. GW460-11-11-14-LB5

 Score =  162 bits (410), Expect = 9e-45
 Identities = 99/296 (33%), Positives = 165/296 (55%), Gaps = 12/296 (4%)

Query: 5   LEAYCAHLRNERQVSEHTSQGYRRDLEKVIAYC----EEHGIADWQALQIQQLRQLIARL 60
           ++ + ++L+ ER +S ++   Y  D++K+I +     EE  + D   + I  L+  I+ L
Sbjct: 7   IKGFKSYLKLERSLSSNSVDAYLSDIDKLIQFFQSLNEEPKLTD---ITITHLKSFISWL 63

Query: 61  HHHGQSPRSLARLLSAVRGLYRYLNREGLCQHDPANGLSAPKGERRLPKVLDTDRALQLL 120
           +  G    + AR++S ++  + YL  E +  +DP   L APK  R+LP  L+     +L+
Sbjct: 64  NDLGMQASTQARVISGLKAFFSYLMLEEVISNDPTALLEAPKLSRKLPDTLNIYEINELI 123

Query: 121 DGGVDDDFIARRDQAILELFYSSGLRLSELTNLDLDHLDLAAGLVQVLGKGGKARVLPVG 180
            G         R++AI+E+ Y  GLR++ELT L + ++      ++V+GKG K R++P+G
Sbjct: 124 AGIDASKSEGMRNKAIMEVLYGCGLRVTELTELRISNVFPQIEFIKVIGKGNKERLVPIG 183

Query: 181 RKAREALQAWYRL----RGIGNPRDRAVFITRQGNRISPRAVRLRVK-VAGERELGQHLH 235
             A + L  +         I    +  +F+ R G ++S  ++   +K +A    L + + 
Sbjct: 184 SVALKLLDIYINEVRVHANIKKGHEDFIFLNRFGAKLSRISIFNLIKSLAISTGLKKTIS 243

Query: 236 PHMLRHSFASHVLESSQDLRAVQEMLGHADISTTQIYTHLDFQHLAAVYDSAHPRA 291
           PH LRHSFA+H++E   DLRAVQEMLGH+ I+TT+IYTH+D  +L  V    HPRA
Sbjct: 244 PHTLRHSFATHLIEGGADLRAVQEMLGHSSITTTEIYTHIDRDYLREVITQFHPRA 299