Pairwise Alignments

Query, 299 a.a., Tyrosine recombinase XerC from Pseudomonas putida KT2440

Subject, 371 a.a., integrase family protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  179 bits (453), Expect = 1e-49
 Identities = 117/336 (34%), Positives = 173/336 (51%), Gaps = 55/336 (16%)

Query: 8   YCAHLRNERQVSEHTSQGYRRDLEKVIAYCEEHG------------------------IA 43
           +  HL  E+  ++ T   Y  D+++  A+ E+ G                        + 
Sbjct: 2   FLVHLGMEKGYADATVTAYGTDMDQFAAFLEDEGDGPAIPGRPSLLNLNPAPSPAPLSLD 61

Query: 44  DWQALQIQQLRQLIARLHHHGQSPRSLARLLSAVRGLYRYLNREGLCQHDPANGLSAPKG 103
             + +  + +++ +A LH    +  S+AR LSA+R  +R+L R      DP  G+  PK 
Sbjct: 62  TPEHITKRHVQRFLAELHRQRIAKSSVARKLSALRAFFRFLLRLRRVTADPTAGVHNPKQ 121

Query: 104 ERRLPKVLDTDRALQLLDG----------------------GVDDDFIARRDQAILELFY 141
           ++R P  L+ D+A  LLD                       G  D  +  RD A+ EL Y
Sbjct: 122 DQRHPHALNVDQAFALLDERRQRKALATAHATAHAGHGTDFGPTDAALLARDLALAELLY 181

Query: 142 SSGLRLSELTNLDLDHLDLAAGLVQVLGKGGKARVLPVGRKAREALQAWYRLR-----GI 196
            SGLR+SE   L++   D A+G+V+V+GKGG+ R+ P+   AR+AL AW  +R     G 
Sbjct: 182 GSGLRVSEALELNVLDADPASGVVRVMGKGGRERMSPLSDTARDALSAWLAVRHQVDEGR 241

Query: 197 GNPRDRAVFITRQGNRISPR-AVRLRVKVAGERELGQHLHPHMLRHSFASHVLESSQDLR 255
           G P   A+F+  +G R++ R A R+   +     L Q + PH LRHSFA+H+LE+  DLR
Sbjct: 242 GEP---ALFLGARGGRLNRRQAARIIETLCLRAGLPQAISPHGLRHSFATHLLEAGADLR 298

Query: 256 AVQEMLGHADISTTQIYTHLDFQHLAAVYDSAHPRA 291
           +VQE+LGHA +STTQ YTHL    L  VYD AHPR+
Sbjct: 299 SVQELLGHARLSTTQRYTHLTLSRLVDVYDRAHPRS 334