Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Pseudomonas putida KT2440

Subject, 419 a.a., transcription termination factor Rho from Pseudomonas stutzeri RCH2

 Score =  788 bits (2036), Expect = 0.0
 Identities = 398/419 (94%), Positives = 415/419 (99%)

Query: 1   MNLTELKQKPITDLLEMAEQMGIENMARSRKQDVIFALLKKHAKSGEEISGDGVLEILQD 60
           MNLTELKQKPIT+LLEMAEQMGI+NMARSRKQDVIF+LLKKHAKSGEEISGDGVLEILQD
Sbjct: 1   MNLTELKQKPITELLEMAEQMGIDNMARSRKQDVIFSLLKKHAKSGEEISGDGVLEILQD 60

Query: 61  GFGFLRSADASYLAGPDDIYVSPSQIRRFNLRTGDTIVGKIRPPKEGERYFALLKVDTIN 120
           GFGFLRSAD+SYLAGPDDIYVSPSQIRRFNLRTGDTI+GKIRPPKEGERYFALLKVD+IN
Sbjct: 61  GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTIIGKIRPPKEGERYFALLKVDSIN 120

Query: 121 FDRPENAKNKILFENLTPLFPNKRLKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP 180
           +DRPENAKNKILFENLTPLF N+RLKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP
Sbjct: 121 YDRPENAKNKILFENLTPLFANERLKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP 180

Query: 181 KAGKTIMLQNIAANITRNNPECHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV 240
           KAGKTIMLQNIA+NITRNNPECHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV
Sbjct: 181 KAGKTIMLQNIASNITRNNPECHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV 240

Query: 241 QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF 300
           QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF
Sbjct: 241 QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF 300

Query: 301 FGAARNIEEGGSLTIIATALVETGSKMDEVIYEEFKGTGNMELPLDRRIAEKRVFPAINI 360
           FGAARNIEEGGSLTI+ATALVETGSKMDEVIYEEFKGTGN+EL LDRRIAEKRVFPAINI
Sbjct: 301 FGAARNIEEGGSLTILATALVETGSKMDEVIYEEFKGTGNLELQLDRRIAEKRVFPAINI 360

Query: 361 NRSGTRREELLTADDELQRMWILRKLLHPMDEIAAIEFLVDKLKQTKTNDEFFLSMKRK 419
           NRSGTRREELLT+++ELQR+WILRKLLHPMDE AAIEFL+DKLK TKTNDEFF+SMKRK
Sbjct: 361 NRSGTRREELLTSEEELQRIWILRKLLHPMDESAAIEFLLDKLKDTKTNDEFFMSMKRK 419